ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11076_29

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(23796..25700)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 634.0
  • Bit_score: 1206
  • Evalue 0.0
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ id=24513874 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 622.0
  • Bit_score: 368
  • Evalue 1.10e-98
type IV pilus secretin PilQ similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 664.0
  • Bit_score: 321
  • Evalue 5.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1905
GTGAATGCACGGAGGGTGATTACCCTGTTTCTCACGCTGTCGGCTGGCGCGCTCCTGAGCGCGTCGGGGCGAGTGGCCCCCGGGGTCCCGGGAGCTGCCGCCACCAGTGACGTGCGGCTGAAGACGATCAGTACGCGCGTGGGCGCCGCGGGCGCCTCGCTCGTGATTGAAGCCACCGAGCCCGTGGGGTACGTCGCCACGCGTCCCGATCCGTTGACCGTCGCCCTCGATTTTCGCAATGTGGACGCGACGGGCGTCGCCAACCGCGTCGCGGCGAATGCGATAGGCCCTATTGCCGCCGTCGCGGTGGAAGCCAGCGAGTGGCTGGGCGCTCCGGCTTCGCGCGTGCGCATCACGCTGTCGCAGCCCGTCACGCACCGCGTGCGCAGCAATCGCAACACGGTGGTCATCGAGTTTGACAGGTTTGACAGGCCGTCCGCCAAGGCGCCCGCAGCTGCCGTAGGGTCGGTCGCCCTGGGCTCGACGAGCGGCGGCGGGGCGGCTGACGCCTTGAAGGCGCTTGAGATCGCCCAGTCGCCTGCGGTCGAACCGGTGGCGGCCGAGACCGTCAGTCGCGCGCCCAGGCCGTCGAGCTCGGGCGTCACCCGCTTCGGGCAAGCCGCTGCGTTGCAGCAGCCGGCCACGCCCGGGCAGGGCGATCAAACGGCCCGCAGGTTCACTGGCAACCTGGTCAGCCTCGATTTTCAGGGCGCCGACTTGCGAGCCGTCATCCGCACGTTTGCCGAGATCAGCGGCCTGAACATCGTCATCGACCCGCAAGTGATGGGGTCGGTCGACGTGCAGTTGCGGGAAGTGCCCTGGGATCAGGCGCTCGACCTCATCCTGCGCTCAAACAAGCTCGGGTACGCTGTCGACGGCACGATCGTCCGAATCGTGCCCGTGACGGTGCTGAAGGCCGAGGCGGACGAACGCCTCGCTTTGGCGAAAGCCGAGCAGGACGCCGCCCTGAACGCCAGCCCGGTGGAGAGGATGACACTTCAGCTCAGCTACTCGACAGGCGCACAAATTGTGGAACTCCTCAGGTCCGGGAACATTCTCTCGACCAGGGGACAGGCGTTTGTGGACGCCCGGACGAACACGCTCATTGTCACCGACGTGCAGGAACGGCTGCCAGGCGTCACGGCACTTATCGCCAGTATTGACAAACCGCAGCCGCAGGTTGAGATCGAAGCGCGGATCGTGCAGACCAACAAGACCTACGCGCGACAGCTCGGCGTCCAGTGGGGCTTCAATGCCACGCCGGCCAATGACGTGCTCCTCGGAGGCCGGATTGCGGGCGGCACAGCCGTGCAGGGGCCGAACGCGACGTCGACAGCCGTCAATCAGCCGGTGGGAGGCGCGACGAGCGCCGTGGGCATCGCGCTCGGCTCCGTTAACGGCACCTTCAGGCTCGATGCAGCGCTGTCGGCGCTCGAGGCGTCGGGGAACGGCCGGATTCTCTCCACACCGAAGGTGTCGACCGTCAACAACGTGCAGGCGGAGATGACGCAGGGCATCCAGATTCCGATCCAGCAGGTGGCCAATAACACGATCACGGTGAACTTCAAAGACGCGGCCCTCAAGCTGCTCGTGACACCGCAGATCACCGCGTCGAACACCGTCATCATGAACATCACACTCGAGAACGCCACGCCAGACTTTGGCCGGCAGGTCGGCGGCATTCCGCCCATCAATACGCAGCGCGCGCTGACGACCGTGCTCGTCAACGACGGGCAGACGACCGTGATCGGCGGCATTTACACCAGCACGACGACCAATTCGAGAACGGGCACGCCGGGGTTGAGCGGGCTTCCGCTGTTCGGGTGGCTGTTCAGGAGAGACGTGATCGACGACCAGAACACCGAGCTGCTGATCTTCATCACTCCACGTATCATCAGAGGATGA
PROTEIN sequence
Length: 635
VNARRVITLFLTLSAGALLSASGRVAPGVPGAAATSDVRLKTISTRVGAAGASLVIEATEPVGYVATRPDPLTVALDFRNVDATGVANRVAANAIGPIAAVAVEASEWLGAPASRVRITLSQPVTHRVRSNRNTVVIEFDRFDRPSAKAPAAAVGSVALGSTSGGGAADALKALEIAQSPAVEPVAAETVSRAPRPSSSGVTRFGQAAALQQPATPGQGDQTARRFTGNLVSLDFQGADLRAVIRTFAEISGLNIVIDPQVMGSVDVQLREVPWDQALDLILRSNKLGYAVDGTIVRIVPVTVLKAEADERLALAKAEQDAALNASPVERMTLQLSYSTGAQIVELLRSGNILSTRGQAFVDARTNTLIVTDVQERLPGVTALIASIDKPQPQVEIEARIVQTNKTYARQLGVQWGFNATPANDVLLGGRIAGGTAVQGPNATSTAVNQPVGGATSAVGIALGSVNGTFRLDAALSALEASGNGRILSTPKVSTVNNVQAEMTQGIQIPIQQVANNTITVNFKDAALKLLVTPQITASNTVIMNITLENATPDFGRQVGGIPPINTQRALTTVLVNDGQTTVIGGIYTSTTTNSRTGTPGLSGLPLFGWLFRRDVIDDQNTELLIFITPRIIRG*