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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5669_13

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 7958..8611

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 433
  • Evalue 1.40e-118
ECF subfamily RNA polymerase sigma-24 factor id=12555747 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 205.0
  • Bit_score: 259
  • Evalue 4.30e-66
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 171
  • Evalue 2.00e-40

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGACCGCCGACCAGCCGGCTCCGTCACTCGACGCGACCGAAGCGCTCATCGAACGGTGCCTGCGCGGCGACGACCAAGCATGGCAGCTCATCGTCAGACAGTACTGGCGGAAGGTCTTCAACGTCGCGTACAAGTTCGTCGGGAGGCACGAAGAGGCCGAGGATCTCACGCAGGACGTATTTCTCAAGGTCTTCAAGTCGCTCGAAACCTTCGACCGGCGCGCGAACTTCCAGACGTGGCTCATCAGCGTCAGCCGGAATCTCTGCATCGATCACTATCGCAGCGCGCGCAAGGAGCGCGAGGCGATCAACCGCGACATCGACGCCAGCGAGTTGACGCCGGCATCCGGCGAGGCGGGCCCCTTTGCCGTGCTCGAGCAGCGCGACCGCGTCACGCTGCTCCGCCAGGCGCTCACGGGCCTCCCCGAGACACTGCGCACGGCCGTGATGATGCGCGACATCCAGCAGCTCTCGTACCAAGAGATCGCCGACAGGCTGCGGCTGCCGGAAGGCACCGTCAAGTCGCGCATCAACCGTGGGCGCGCCGAGCTGGCCAGACAGATTAGGAAAGTACGCGGCGACGATTTCAGTCCCTCCGGCCCGGGATCGCGTGGCACCGGCCGGCATCGCCAACGAACGGGAGCCTATCGATGA
PROTEIN sequence
Length: 218
MTADQPAPSLDATEALIERCLRGDDQAWQLIVRQYWRKVFNVAYKFVGRHEEAEDLTQDVFLKVFKSLETFDRRANFQTWLISVSRNLCIDHYRSARKEREAINRDIDASELTPASGEAGPFAVLEQRDRVTLLRQALTGLPETLRTAVMMRDIQQLSYQEIADRLRLPEGTVKSRINRGRAELARQIRKVRGDDFSPSGPGSRGTGRHRQRTGAYR*