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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_32597_15

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 14569..15156

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding region RNP-1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 403
  • Evalue 1.80e-109
RNA-binding protein RNP-3 id=12556015 bin=CNBR_ACIDO species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 207.0
  • Bit_score: 187
  • Evalue 1.40e-44
RNA-binding region RNP-1 similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 95.0
  • Bit_score: 93
  • Evalue 7.90e-17

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 588
TTGGCTGTCCGTCTGTTTGTCGGAAACCTGTCGTACGGCACCACCGAAGCGGACTTGCGTACCTACTTCGGCACGGTGGCACCACCTTCGCAGGTCGTCCTGCCGGTTGACCGGGAGACCGGCCGTCCACGAGGCTTTGCGTTTGTCGAGTTCCAGGATCGCGCGCACGCGGAACGGGCGATCCAGCAGTTCAACGGCCAGATCTTCGCCGGACGCCCGCTCGCGGTGAGCGAGGCGCGCGCGCGCGAAGACCGCGGCCCGGGCGGCCCGCCGCGGCCTGGCGGCTTCAGTCCCCGCCCGCCGTCGTCGTTTGGTGCGCCACGTCCGTTCGAGCCGGCCGGAGCGCCGGGCGCGCCCGGGCGCAGCCGCAACTTCGGACCCGACGCCAAGCCTCAGCGTGGCTTCGGCGCCAAGGGCAAGAAAGGCAAAGAGACCGAGCGCCCGCGCGGTCCCATCCCCACAAAGATCACCGGCCGCTCGTTCACACTCGACGACGCGGACTCGACGGCCGACGAGGCGCTGCCGGACATCGACGACGTCGCGACGAGCAAGCCACACGAGGACGAGGACGCGGACAAAGACGAATAA
PROTEIN sequence
Length: 196
LAVRLFVGNLSYGTTEADLRTYFGTVAPPSQVVLPVDRETGRPRGFAFVEFQDRAHAERAIQQFNGQIFAGRPLAVSEARAREDRGPGGPPRPGGFSPRPPSSFGAPRPFEPAGAPGAPGRSRNFGPDAKPQRGFGAKGKKGKETERPRGPIPTKITGRSFTLDDADSTADEALPDIDDVATSKPHEDEDADKDE*