ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5217_15

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 11818..12990

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] Ta similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 753
  • Evalue 1.40e-214
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=12555606 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 388.0
  • Bit_score: 373
  • Evalue 2.20e-100
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 389.0
  • Bit_score: 352
  • Evalue 1.50e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGTTTGTCACAGCGATCATCGCCGCCGCCGGACGCGGAGAGCGATTCGGCGTCGGCCTCAAGCAACTGCTGTCGATCGACGGCCGGACGATCCTCGACCGGAGCGTGCGAGCCTATCTCACGCATCCGTCGGTCGACGAGGTGGTCGTCGCGCTGCCCGAGGAGCTGGTCGCCGATCCGCCGGCGTACCTGCGGGATGCGGGCAAACCCTTGCACCTTGTGGCTGGCGGACGCCGGCGTCAGGACTCGGTTGCCAATGCGTTCGGTGTCGTGGCGGCGGCAAGCGACGTGGTCGTTGTCCACGATGCCGCACGTCCGTTTGCAAGCGAGGGTCTCATCACGCGAACGATTGGCGCCGCCGCTCGATCTGGTGCCGCGCTGGCCGCCGTCCAGGCGCGCGACACGGTCAAGCGTGTGTGGAAGGGCGGCGCCGGCCACTATGTCGTGCGCGAGACCGTTCCACGTGAAGCGATCTTTCTCGCGCAGACGCCGCAGGCCTTTCGACGCGACGTGCTGCGCGACGCGCTGGCGAGCGGATCGCGCGGCGCGGACGCGACCGACGAGGCGACGCTCGCCGAGCGGGCCGGCCACACGGTGCAGATCGTCGAGGGCGAAGTGTCGAACATCAAGATCACGACGCCCGACGACGTGCCGATGGCCGAGACGATCGCGCGCGGCGGTTCGGGTGGAGCGGCGGCGCTGCGCATCGGGACCGGCTACGACCTGCATCGGCTCGTCGATGGGCGGCCGCTCGTCCTGGGCGGTGTCACGATCCCCTTCGCGCGGGGCCTTGAGGGGCATTCGGATGCCGACGTGGTCTGCCACGCGATCGCGGACGCCGTCCTGGGCGCCGCGGCGTCGGGCGACATCGGTCGGCACTTTCCAGACACCGATCCGCAGTGGCGTGGTGCGTCGAGCCTCGATCTGTTACAGCGGGCGGCCCGGATGATTCGCGAGCGCGGGCTCGAGGTCGGCAACGTCGATGCCTCTGTCATCGCCGAGCGTCCGAAGCTGGCGCCGTACGTCGAGGCCATGCGCGCCAAGGTGGCCGAGGCGCTCGGCATCTCGCCCGATCGTGTCAGCGTCAAAGGCAAGACCAACGAGGGCGTGGGCGAGCTGGGACGCAATGAAGCCATTGCTGTCCATGCGGTCGCGTTGTTACGCCGGGTCTGA
PROTEIN sequence
Length: 391
MFVTAIIAAAGRGERFGVGLKQLLSIDGRTILDRSVRAYLTHPSVDEVVVALPEELVADPPAYLRDAGKPLHLVAGGRRRQDSVANAFGVVAAASDVVVVHDAARPFASEGLITRTIGAAARSGAALAAVQARDTVKRVWKGGAGHYVVRETVPREAIFLAQTPQAFRRDVLRDALASGSRGADATDEATLAERAGHTVQIVEGEVSNIKITTPDDVPMAETIARGGSGGAAALRIGTGYDLHRLVDGRPLVLGGVTIPFARGLEGHSDADVVCHAIADAVLGAAASGDIGRHFPDTDPQWRGASSLDLLQRAARMIRERGLEVGNVDASVIAERPKLAPYVEAMRAKVAEALGISPDRVSVKGKTNEGVGELGRNEAIAVHAVALLRRV*