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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4511_14

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(18716..20116)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 466.0
  • Bit_score: 912
  • Evalue 2.20e-262
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12556226 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 459.0
  • Bit_score: 715
  • Evalue 2.80e-203
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 407.0
  • Bit_score: 682
  • Evalue 9.60e-194

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
GTGGACACTGATCGACCAACGGGCGAGCAACCTCAGCAGCCCCCAACCCCCACCACGCCGCAACAGCAATCTCAGCCGTCTCCGAAGGGGAACGGCGCCGGCGCTCAGGACAAGGGCGCCGCGCCACCCGAGAGAATCGAGCGCATCGATCTCGCGACGCTCAAGGACATGAGCGTCGGCGCGCTGACCAAGATCGCCAAGCAGCTCGATGTGCCGGGCGCGACCGGCATGCGCAAGCAGGAGCTGATCTTCGAGATTCTGAAGGCGCGCGCCGAAAAGAGCGGCCTGATCTTCTCTGAGGGGGTTCTCGAAGTGCTCCCTGACGGGTTCGGGTTCCTCCGCGCCCCCGACTATAACTACCTGCCGGGACCGGACGACATCTACGTCTCGCCTTCGCAGATCCGGAAGTTCGATCTGCACACCGGCGACACCGTCTCCGGCCAGATTCGGCCGCCCAAGGATGGCGAGCGATACTTCGCGCTGATCAAGGTCGAGGCGGTGAATTTCGAGCCGCCCGAGCGTGCGCGCGAGAAGGTGTTCTTCGAGAACCTGACGCCGCTGTACCCGCAGTCGAAGATTTCGCTCGAGACCGAGGGCGACAACCTCTCCGCCCGCGTGCTGGATCTGCTGGTGCCTATCGGCAAAGGCCAGCGGGGCCTCATCGTCGCGCCTCCGCGCACCGGGAAGACCATGCTGCTGCAGAACATCGCGAACAGCATCACGGCGAACCATCCGGAGGTGTACCTGATCGTGCTGCTCATCGACGAGCGGCCCGAAGAGGTGACCGACATGCAGCGATCGGTGCAGGGCGAGGTCGTCTCGTCGACCTTCGACGAGCCCGCGCAGCGCCACGTGCAAGTCGCCGAGATGGTGATCGAGAAAGCGAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGACTCCATCACACGTCTGGCGCGCGCCTACAACACGATCGTGCCGCCGTCGGGCAAGATCCTTTCTGGTGGCGTGGACAGCAACGCCCTGCAGCGGCCCAAGCGCTTCTTCGGCGCGGCCAGAAACATCGAGGAGGGCGGTTCGCTGACCATCGTGGCCACGGCGCTCATCGACACCGGCTCGCGGATGGACGATGTGATCTTCGAAGAGTTCAAGGGCACCGGCAACCTCGAGATTCTTCTCGACCGGAAGCTGACGGATCGCCGCGTGTTCCCGTCGATCGACATCCAGAAGAGCGGCACCCGCAAAGAGGAGCTGCTCATCCCGAAAGACGACCTCAACCGCGTGTGGGTGCTCCGCAAAGTGCTCACGCCGCTCTCGCCCGTCGAGGCCATGGAGCTGCTGCTCTCGAAGATGTCCAAGACGAAATCCAACCAGGACTTCCTCGCGTCGATGTCGAACGGAAAAGGCTAG
PROTEIN sequence
Length: 467
VDTDRPTGEQPQQPPTPTTPQQQSQPSPKGNGAGAQDKGAAPPERIERIDLATLKDMSVGALTKIAKQLDVPGATGMRKQELIFEILKARAEKSGLIFSEGVLEVLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRKFDLHTGDTVSGQIRPPKDGERYFALIKVEAVNFEPPERAREKVFFENLTPLYPQSKISLETEGDNLSARVLDLLVPIGKGQRGLIVAPPRTGKTMLLQNIANSITANHPEVYLIVLLIDERPEEVTDMQRSVQGEVVSSTFDEPAQRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTIVPPSGKILSGGVDSNALQRPKRFFGAARNIEEGGSLTIVATALIDTGSRMDDVIFEEFKGTGNLEILLDRKLTDRRVFPSIDIQKSGTRKEELLIPKDDLNRVWVLRKVLTPLSPVEAMELLLSKMSKTKSNQDFLASMSNGKG*