ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_21393_14

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(8895..10337)

Top 3 Functional Annotations

Value Algorithm Source
pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase 1 (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 941
  • Evalue 5.80e-271
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] id=12555651 bin=CNBR_ACIDO species=Rhizobium giardinii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 273.0
  • Bit_score: 321
  • Evalue 2.00e-84
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 348.0
  • Bit_score: 260
  • Evalue 7.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGCCGAACCCCCGCATCGCGATCACCTCCGGCGATCCGGCTGGCATCGGTCCTGAGATTGCGGCCGCGGCCGCCCTCGACAGCCGCGTCCTGGCTGTCTGCGAACCGATGGTGTATGGCGTGGCGGACGGGCGCCGCTTCACACCAGGCGTGCTGAGCGCCGAGGCTGGTCGCGCTGCCTACGACACGATCGTGCGCGCCGTCGAGGACGCCCAGAACGGTCGCGTCAACGCGATCGCCACGGCGCCCGTGAACAAGGAAGCCTTCCACCTGGCCGATTTGCCGTGGGCCGGCCATACGGATCTCTTGAAGCACCTGACCGGCGCGCGCGACGTGGCCATGATGTTCTACGCAGAAGCGCTGCGCGTTGTGCTCGCGACGGTACATATCGCGCTCGCCGATGTGCCGCGCGTGCTGACCCAGGCCTCGCTCGAGTCGACGATTGGTCTCACGGCCGGTGCGCTGCCGCACTTCGGCTTCGCCTCGCCGCGGATTGCGGTCGCCGGTCTCAACCCCCATGCCGGCGAGCACGGGCTGTTCGGTCGGGAAGAGGAGACGGCCATCGCGCCGGCCATCGCGGCGTGCCGCGATCGCGGCATCGACGTCCGCGGCCCGTACCCCGGAGACACGGTCTTTGTTCGCGCCCGCCGCGGCGAGTTCGACGTCGTCATTGCCTGCTACCACGATCAGGGGCTCATTCCCGTGAAGCTGCTCGCATTTGGGGAGGCGGTGAACGTCACGCTCGGCGACACGATCGTGCGCGCCGTCGAGGACGCCCAGAACGGTCGCGTCAACGCGATCGCCACGGCGCCCGTGAACAAGGAAGCCTTCCACCTGGCCGATTTGCCGTGGGCCGGCCATACGGATCTCTTGAAGCACCTGACCGGCGCGCGCGACGTGGCCATGATGTTCTACGCAGAAGCGCTGCGCGTTGTGCTCGCGACGGTACATATCGCGCTCGCCGATGTGCCGCGCGTGCTGACCCAGGCCTCGCTCGAGTCGACGATTGGTCTCACGGCCGGTGCGCTGCCGCACTTCGGCTTCGCCTCGCCGCGGATTGCGGTCGCCGGTCTCAACCCCCATGCCGGCGAGCACGGGCTGTTCGGTCGGGAAGAGGAGACGGCCATCGCGCCGGCCATCGCGGCGTGCCGCGATCGCGGCATCGACGTCCGCGGCCCGTACCCCGGAGACACGGTCTTTGTTCGCGCCCGCCGCGGCGAGTTCGACGTCGTCATTGCCTGCTACCACGATCAGGGGCTCATTCCCGTGAAGCTGCTCGCATTTGGGGAGGCGGTGAACGTCACGCTCGGTCTTCCGATCGTGCGCACGTCTGTCGACCATGGGACCGCCTTTGACATTGCGGGCAGAGGAGTCGCGAACCCGGAGAGCATGATCGCAGCCGTCCTTCTTGCCGCGCGGCTAGCCAAGTCGCGGTCCGCCTAA
PROTEIN sequence
Length: 481
MPNPRIAITSGDPAGIGPEIAAAAALDSRVLAVCEPMVYGVADGRRFTPGVLSAEAGRAAYDTIVRAVEDAQNGRVNAIATAPVNKEAFHLADLPWAGHTDLLKHLTGARDVAMMFYAEALRVVLATVHIALADVPRVLTQASLESTIGLTAGALPHFGFASPRIAVAGLNPHAGEHGLFGREEETAIAPAIAACRDRGIDVRGPYPGDTVFVRARRGEFDVVIACYHDQGLIPVKLLAFGEAVNVTLGDTIVRAVEDAQNGRVNAIATAPVNKEAFHLADLPWAGHTDLLKHLTGARDVAMMFYAEALRVVLATVHIALADVPRVLTQASLESTIGLTAGALPHFGFASPRIAVAGLNPHAGEHGLFGREEETAIAPAIAACRDRGIDVRGPYPGDTVFVRARRGEFDVVIACYHDQGLIPVKLLAFGEAVNVTLGLPIVRTSVDHGTAFDIAGRGVANPESMIAAVLLAARLAKSRSA*