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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_16512_16

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(6709..7332)

Top 3 Functional Annotations

Value Algorithm Source
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 207.0
  • Bit_score: 399
  • Evalue 3.60e-108
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=12555578 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 207.0
  • Bit_score: 264
  • Evalue 1.30e-67
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 206.0
  • Bit_score: 201
  • Evalue 2.90e-49

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGATGACTCTTGACGTTGTAAACGCTCAGAACGAAAAAGTCGGCGCGGTGGACGTGCGCGACGAGGTGTTCGGCGTTCGCGTGAATGCCGACCTGATGTGGGAGTCGGTCGTGCATTTGAACGCGAAGGAGCGGCGCGGCACGCAGATGGCGAAGAACCGGGCGCTCGTCAGCGGCAGCGGCAAGAAGCCATGGCGCCAGAAGGGCACCGGCCGTGCGCGCGTCGGCTCGATTCGCAATCCGCTGTGGCGTCACGGCGGAACGGTGTTTGCCCCGCAGCCCCGGAGCTACGACTACGCGCTCCCGAAAAAGGTCGGGCTGGGCGCACTGCGCTCGGCGCTCGCCGCCAAGGTCAGAGACGGCGCGCTCGTCGTGGTCGACGAGCTCAAGGCGGCCGAGATCAAGACGAAGCACGCCGTGGCGCTCCTCGATCGGTTGGGTGTCGCCGGCAAGGCGGTGCTCGTGGACGTGGCCGTGGATGAGAAGCTGTTGCGGTCGGTGGGCAACATGACCGGCGTGTCGTTGGTGGCCAGTGCGCGGCTGACGGCGCGCGACGTCATCGATGCGCACAAGGTCGTGGCCACCAAGAGCGCGATTGAGAGATTACAGGAGGCGTTGGCGTGA
PROTEIN sequence
Length: 208
MMTLDVVNAQNEKVGAVDVRDEVFGVRVNADLMWESVVHLNAKERRGTQMAKNRALVSGSGKKPWRQKGTGRARVGSIRNPLWRHGGTVFAPQPRSYDYALPKKVGLGALRSALAAKVRDGALVVVDELKAAEIKTKHAVALLDRLGVAGKAVLVDVAVDEKLLRSVGNMTGVSLVASARLTARDVIDAHKVVATKSAIERLQEALA*