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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5639_21

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 23486..24313

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 547
  • Evalue 1.40e-152
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=12555820 bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 258.0
  • Bit_score: 299
  • Evalue 4.80e-78
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 255.0
  • Bit_score: 282
  • Evalue 1.30e-73

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGCCGCGCTTCAAGCTGACCATCGAGTACGCCGGCACGCGGTACAGCGGCTGGCAGATTCAGAAGAACGCGCGGACGATTCAAGGTGAGATCGACCGTGCGGTGCGCTCGGTAACGGCCCGAAAAGACTTCGAGCTCTACGGATCGGGCCGCACCGACGCGGGCGTGCACGCCCTCGCCCAGGTGGCGCATCTCGACGCCGCCACCTCACTTCCCCCCGACACGCTGCGGCAGCGGCTCAACGACGAGTTGCCGAGCGACATCAACATCCTCTCGGCCGTCACCGTCCCCCACCGCTTCCATGCGCGCCACGATGCCGTGGCGCGGCGCTATCTCTACCAGGTGTCGAGGCGCCGGACGGCGCTCGCCAAGACGTACGTCTGGTGGGTGAAGGATCCGATCGACGTCGAACGGATGCGTCAGGCCGCGACGGCGTTTCTCGGCATGCGGGACTTTCAGTCCTTCGCCGCCTCAGATGCGGCTCGGGAAGAGCGATCCACGCGCGTCCTGGTCGACCGACTTGAGATCGTCGAAGACGGCGACCTCGTGCTCATCGCGATCGAGGGATCGCACTTCCTGTGGAAGATGGTCCGGCGGATCGTGGGCGTGCTCGTGGAGATCGGGCGCGGCGGACTCGATGCGACCACTGCCGGCCGGTTTCTCATTGAGGCTTCTGAGGTACCGGCCCGGCTGACCGCGCCGGCGTCTGGACTGTTTCTCGAGCGCGTGTACTACCCGAACGACGCGCGTGAGACCACGGTGCGCCCCGCGACGCCCATCCGGCCGGCCCAAGGTCCGCCTGAAGGCGGACACTACATCAGGACGTAG
PROTEIN sequence
Length: 276
VPRFKLTIEYAGTRYSGWQIQKNARTIQGEIDRAVRSVTARKDFELYGSGRTDAGVHALAQVAHLDAATSLPPDTLRQRLNDELPSDINILSAVTVPHRFHARHDAVARRYLYQVSRRRTALAKTYVWWVKDPIDVERMRQAATAFLGMRDFQSFAASDAAREERSTRVLVDRLEIVEDGDLVLIAIEGSHFLWKMVRRIVGVLVEIGRGGLDATTAGRFLIEASEVPARLTAPASGLFLERVYYPNDARETTVRPATPIRPAQGPPEGGHYIRT*