ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_26

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 26349..26555

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB50 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 64.0
  • Bit_score: 82
  • Evalue 2.30e-13
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 143
  • Evalue 8.90e-32
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 64.0
  • Bit_score: 76
  • Evalue 3.50e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCGACTATGAATGGCACGATTAAGCGACTGGTCAGTGACAAAGGGTTTGGTTTCATTCTAGCGGGCGACGGCAGTGAGTATTTCTTTCATCAATCGGCTTGTGCTCAGACGCCGTTCGACGACCTGCGTGAGGGACAGGCCGTGACATTCGACCAGGGCCAGGGCCCGAAGGGGCCGAGAGGCGAGAATGTCAGGGTCGCCTAG
PROTEIN sequence
Length: 69
MATMNGTIKRLVSDKGFGFILAGDGSEYFFHQSACAQTPFDDLREGQAVTFDQGQGPKGPRGENVRVA*