ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_13731_22

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 20464..21231

Top 3 Functional Annotations

Value Algorithm Source
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 255.0
  • Bit_score: 505
  • Evalue 4.40e-140
TpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=12555690 bin=CNBR_ACIDO species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 254.0
  • Bit_score: 350
  • Evalue 1.30e-93
tpiA; triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 247.0
  • Bit_score: 287
  • Evalue 4.90e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCGCATCCCCTTCATTGCTGGGAATTGGAAGATGTTCAAGACCGTGCAGGAAACGGTCGTGTTCGTCAAAGAGCTGGGCGGCTTCGTCAAGGACGTCGCCGACGTCGAGATCGTCGTGGCGCCGCCGTTCACCTCCGTGCACAGCGCCGCTGTTGCCGCACGCAACACCAACATCGGTGTGGCGGCGCAGGATCTCTATTGGGAACGCGAGGGCGCGTTTACTGGCGAAGTGTCGGCGAGCATGATCAAAGAGGCCGGCGCCGAGTACGTCATCGTCGGACACTCCGAGCGGCGGCGGCTGTTTGGCGACACCGACCGGGCGGTGAATCGCAAGGCGATCGCCGCCATCGGGGCCGGGCTCACGCCGATTGTCTGCGTCGGAGAAACACTCGAGGAGCGCGAGCGCGACCAGACGCTCGCCGTGCTCGATCGGCAGGTCAAGGACGGCCTCGACGGCCTCACAGGCGATCAGGTCGGCGAGATCGTCGTCGCCTACGAGCCCGTGTGGGCGATCGGCACCGGTCGCCATGCGACGGCAGCTCAGGCTGGCGAGGCCCACGCCCACATTCGGAAGCGGCTCGGTCAGTGGTTTGGTGCAGGCGCCGCCGATCGCTGCCACGTCATTTACGGCGGGAGCGTCAAGCCGGAGAACATCAGCGAGCTCATCGCCGAGCCCGATGTCGATGGAGCGCTCGTCGGAGGCGCGAGCCTCGAGGTCGGGAGCTTCGCCGACATCGTGACGAAGAGCCGGCCGGCTGCAGTATAA
PROTEIN sequence
Length: 256
MRIPFIAGNWKMFKTVQETVVFVKELGGFVKDVADVEIVVAPPFTSVHSAAVAARNTNIGVAAQDLYWEREGAFTGEVSASMIKEAGAEYVIVGHSERRRLFGDTDRAVNRKAIAAIGAGLTPIVCVGETLEERERDQTLAVLDRQVKDGLDGLTGDQVGEIVVAYEPVWAIGTGRHATAAQAGEAHAHIRKRLGQWFGAGAADRCHVIYGGSVKPENISELIAEPDVDGALVGGASLEVGSFADIVTKSRPAAV*