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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3091_24

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(22262..23164)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 300.0
  • Bit_score: 579
  • Evalue 3.60e-162
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554557 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 299.0
  • Bit_score: 275
  • Evalue 6.20e-71
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 263.0
  • Bit_score: 146
  • Evalue 1.20e-32

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCCGTCGCTGCAGGTCGACGATGCACTCGTCAAGCGGCTGTATGACCGGGCCAGGGCCGAGCGTTGGAGCCTGCAGCCGCACGCGTTGGCCGAAGCACTCGAGGCGAGTGTCGGCCGGGCGTTCGAGGGGAAGGCGCCGGGCTCGCGTGAGGTCGAGCGGTACCTCGAGGGCCTGCACCTTGAAGATCTGGGAATCGCGTGCGCGTGTGCCGCTGGCGTCGAGGCGGCCTGGGACCATTTCGTGCGCGAGCTCCGGCCGGTCCTTTATCGCGCGGCCGATCTGATCGATCCATCAGGCGAAGCCCGTGAGCTCGCCGACTCGCTGTACGCGGATCTGTACGGCCTGCAGGAGCGGAGCGGCAAGCGGGCATCGCTCTTTCGCTACTTCCACGGGCGGAGCAGCCTCGCCACATGGCTGCGCGCCGTGCTGGCGCAGCGGCACGTCGATCGGTTGCGAGATCGGCGTCGCGTCGAGCCGCTCCCTGACGAAGACTCGTCAGCGGCCATCGCATCGTCGCCGGCGACTCCCCATTCCGATCGACACCGTTATATCGCGCGCATGAAGCAGGCGCTCGGGCTCnnnnnnnnnnnnnnnnnnnnnCGGCTCGGCTGCTACTATGCGCAGGAGCTGACGCTCGCCCAGATCGGCCGGCTGCTCAAGGAGCACGAGGCGACCGTCTCGCGTCATCTGGCGCGCACGCGGCGGACCATTCGGGACGAGATCGAGCGTCAGCTCCGGGCCGACGCGAAGATGAGCGATGCCGAGATGGCGCTGTGCTTCGAGTGCGTCATGGAGGACTCGGGGTCGATCGATCTTGGCAAAATGCTCGAAGGTGGTGCCCAACGCAAGGAATCCGGGTCTGGCCGTTCTAGTGAATTGAAGAAGAGAAGGGCGCCGTGA
PROTEIN sequence
Length: 301
MPSLQVDDALVKRLYDRARAERWSLQPHALAEALEASVGRAFEGKAPGSREVERYLEGLHLEDLGIACACAAGVEAAWDHFVRELRPVLYRAADLIDPSGEARELADSLYADLYGLQERSGKRASLFRYFHGRSSLATWLRAVLAQRHVDRLRDRRRVEPLPDEDSSAAIASSPATPHSDRHRYIARMKQALGLXXXXXXXRLGCYYAQELTLAQIGRLLKEHEATVSRHLARTRRTIRDEIERQLRADAKMSDAEMALCFECVMEDSGSIDLGKMLEGGAQRKESGSGRSSELKKRRAP*