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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2711_2

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 703..1167

Top 3 Functional Annotations

Value Algorithm Source
CspA family cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 304
  • Evalue 1.20e-79
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 113
  • Evalue 1.60e-22
CspA family cold shock protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 67.0
  • Bit_score: 67
  • Evalue 2.80e-09

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGACCCTCTTCCGCCTCCAGGACGATCTCAATGACGACCTCGATGACGACGATGACTTCGAGGATGAGGACGACAGTCCCGCCGAGGATGGCGATGATAAAGAGGAAGAGGATGACGATGAGGATCTCGATGAGGAGGACGACGTCGAAACGTGGCAGGTGTCGGAGCCGTCCTCGATTCTGCTAGAGGTAGGCCTCAGCTTGACTTCCGGCTTGAACCTGCCTAGACTGGCGAAAATTTTCTGTCTGAGCTTGCGTATGCCAACTGGAACGATCGCTCGACTCCTCATCGACAAAGGCTTCGGATTTGTCCGCGACGAAGGCGGCACCGAGTACTTCTTCCACCGCAGCTCGGTCCGTCAGCAGGTCTTCGAGCTGTTGCGTGAAGGCCAGCGCGTGGAATTCACGGTCGAAGAATCCCAAAAGGGCCCGCGGGCGGGCGACGTCAGACTCATCGAGAGCTAG
PROTEIN sequence
Length: 155
MTLFRLQDDLNDDLDDDDDFEDEDDSPAEDGDDKEEEDDDEDLDEEDDVETWQVSEPSSILLEVGLSLTSGLNLPRLAKIFCLSLRMPTGTIARLLIDKGFGFVRDEGGTEYFFHRSSVRQQVFELLREGQRVEFTVEESQKGPRAGDVRLIES*