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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2711_4

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1906..2106)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 137
  • Evalue 6.20e-30
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 64.0
  • Bit_score: 85
  • Evalue 2.00e-14
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 63.0
  • Bit_score: 63
  • Evalue 2.30e-08

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGCCGAGTGGCACGATCAAGCGACTGGTTCGCGACAGAGGCTTCGGATTCATCCGCGACGAGGGCGGCCAGGAGTGGTTCTTCCACCGCAGTTCGGTCGAGGGCAACTTCGATCAGTTGAGCGAAGGCCAGCGCGTCAGCTTCGAGGAAGAGCAGTCGGCCAAAGGGCCGCGCGCCGGCCGCGTCCGCAGCGAGAGCTGA
PROTEIN sequence
Length: 67
MPSGTIKRLVRDRGFGFIRDEGGQEWFFHRSSVEGNFDQLSEGQRVSFEEEQSAKGPRAGRVRSES*