ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_114074_3

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 1560..3089

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 509.0
  • Bit_score: 1013
  • Evalue 7.50e-293
Lytic transglycosylase catalytic n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EIV0_CHLL2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 297.0
  • Bit_score: 305
  • Evalue 7.20e-80
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 297.0
  • Bit_score: 305
  • Evalue 2.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1530
ATGAAAAAAATTATATCAATCTCTGTTTTTTTTCTTTCGGTTCTTTCTTTAGAAGCTCAGAAGGACCAAATTACCGAAATGCTTGATAGTTTGGAAAATCTCTATTATTTCAAAGATGTTAAAGTTACAGAAAGCTCAACCAATAATTATGCACCCGGGTTTGTTCCCAAATTTGATGATGCTACTTATAATACACGTTTAGCTGACATGGCTAAAAACTCCCCATTTAATTACGTTTACAATCCAACAGTAAGAAGTTATATAGATAGATACACACGTAATCCTAAAAGCGCAGCCACTATTTTAGCTTTAAGTAACCTTTATTTTCCTTTATATGAAAAGTATCTTAATCAGAATAAAATCCCTTTAGAGTTGAAATATTTATCTATTGTTGAGTCTGCATTGAATCCAACTGCAAAATCTCAATGTGGAGCTTCGGGGTTATGGCAATTTATGTACGGTACCGGAAAGGTTTATAATTTAGAAATTAATTCATATATCGATGAAAGATTCGATCCTGAAAAAGAAACAATTGCAGCATGTAAATATTTAAAGGATTTATATTCTATTTACAATGATTGGTCGCTTGCGATTGCTGCTTATAATTGTGGCCCTGGTAATGTAAATAAAGCGATGAAACGTTCAGGAAAAAAGGAATTCTGGGAAATTAGAGAATATTTGCCAAAAGAAACTCAAAATTATGTTCCGGCATTTATGGCAGCTTCATATATTATGACTTATAGTAAAGAACATAATATGAGCATTGCAAATATTAAATATTTATACAACGATCTTGATTTTATAACAGTCAGTAAAAAAACGTCTTTAAGCAATATTGCTTATTTATTGGATATTCCTTTGCCGGAATTAAAATATTTAAATCCAAAATATATTATAGGTGTTATTCCGGGTAACAACGATATTGTAATTGTTTCAAAAGATAAAGCTTTAGCGTGGATTGATTATGAAAAAAAATATATGGGAAATGATGTGGCTAGCTCTGTTACAATAAAAGAAAAATCAACTCCTAAAAAGCCAATTGTAAATTCACAAACTGATTTCCCTTCTCCTGGTGTTAAACTGAAAGAAACAAAAAAAACTGAATACGATCCTTTCGGAACAATTAAAAATTCATCCACTCAGGAAGAGAAGATCCTTGAAGAAAATGTTTCTCTTAGCACTCCACCGGTACAAAATGATAGTTCAGTTAATTCTACTGAAGATGAAGAAGAATCTGTTTCACAAATTTTTGTTTGTGAGATTTATGGCAATCAAACCGTTGGTAATAATGGTACTATTTTAATTCGTAATACTGTATTGATTAATATTGATGAAGACACTTATATTCCTATCAATTCCATCATAAAAGGCAGAGTAATATTTAAAGATAATTCAATTTTTATAAAAACATTATCCGCAAAAACTATTAACGGTGAAGTAAGATTTATTTCAGAAAGTGAGATCAGGGAGAAGGTAGAAAAAAATAAAATCTTAATCGAGGACGGTTATACCGTTATTCTTAAAACATAA
PROTEIN sequence
Length: 510
MKKIISISVFFLSVLSLEAQKDQITEMLDSLENLYYFKDVKVTESSTNNYAPGFVPKFDDATYNTRLADMAKNSPFNYVYNPTVRSYIDRYTRNPKSAATILALSNLYFPLYEKYLNQNKIPLELKYLSIVESALNPTAKSQCGASGLWQFMYGTGKVYNLEINSYIDERFDPEKETIAACKYLKDLYSIYNDWSLAIAAYNCGPGNVNKAMKRSGKKEFWEIREYLPKETQNYVPAFMAASYIMTYSKEHNMSIANIKYLYNDLDFITVSKKTSLSNIAYLLDIPLPELKYLNPKYIIGVIPGNNDIVIVSKDKALAWIDYEKKYMGNDVASSVTIKEKSTPKKPIVNSQTDFPSPGVKLKETKKTEYDPFGTIKNSSTQEEKILEENVSLSTPPVQNDSSVNSTEDEEESVSQIFVCEIYGNQTVGNNGTILIRNTVLINIDEDTYIPINSIIKGRVIFKDNSIFIKTLSAKTINGEVRFISESEIREKVEKNKILIEDGYTVILKT*