ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_147778_8

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(2780..4246)

Top 3 Functional Annotations

Value Algorithm Source
single-stranded-DNA-specific exonuclease RecJ Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 488.0
  • Bit_score: 957
  • Evalue 6.10e-276
Single-stranded-DNA-specific exonuclease RecJ id=3825783 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 472.0
  • Bit_score: 594
  • Evalue 9.70e-167
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 488.0
  • Bit_score: 584
  • Evalue 2.80e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1467
ATGGAAAAACGGTGGAGTATAAATTCAAGTGCTGATGAGAAAGTTGTAAATCAACTAGCGGAAGAATTAAAGATTGAGAAGGTGTTGGCGAATTTGCTAGTACAACGTGATATTAAAACGTATGACGATGCGAAAAAATTTTTCCGACCTTCTTTAGATGGTTTGCATGATCCTTTTTTAATGAAGGATATGGATATTGCTATTGCACGTTTAGAAAAAGCAATTTCTGCAAAAGAAAAAATTCTTGTGTTTGGCGATTATGATGTGGATGGAACAACTGCTGTTTCTCTCGTATATTCTTTTTTGAAAAGTTTACCTGCCTCCGAAGGACTTGTGGATTACTACATTCCCGACCGTTATACTGAAGGTTATGGAATCTCTTTTATGGGAATTGATTTCGCAAAAGAAAATAATTTCTCTTTAATCATTGCACTCGATTGTGGAATAAAAGCAAACGATAAAGTTGATTATGCAAATGAACGAAACATCGATTTTATTATTTGCGACCACCATCGTCCGGGCGATACACTTCCGAAAGCGATTGCGATTTTAGATCCTAAACGTAACGACTGCAATTACCCTTTTGACGAATTATGCGGCTGCGGAGTTGGATTTAAGTTGGTGCAGGCCTACGCTCAAAAAAATAATATTCCTTTTTCTGAATTGACGCAATACCTTGATTTAACTGCCATTTCCATTGCTTCGGATCTGGTTCCGATCGTAGGTGAAAACCGCGCTTTGTGTTATTTCGGTTTAGAACAAATAAATAAAAATCCACGAAAAGGGATCAAAGCAATTTTGGATTTAGCGAATATCAAAAAAGAAGTAACGATGAACGAATTGGTGTTCACTGTTGGTCCGCGAATAAATGCTGCAGGAAGAATTGAGACAGGAAGAAATGCGGTTGCACTTTTGGTTTCCGATAATCATGCCGATGCAAAAACATCCGGAATAAATATCAATACTTCGAATACCGAACGCAGAGTGTTGGATGTTAGCATCACACAACATGCATTTAGTATGATTGATGAAAGTGAAGAATTGATAAACCGCAAATCAACGGTTCTCTTTCATCCCGATTGGCATAAAGGGGTGATTGGAATTGTGGCTTCCCGTTTAATAGAAAGATATTATCGCCCGACCATCGTTCTTACGGAGTCGAATGGAATGGCAACCGGTTCTGCGCGTTCTGTAAAAGATTTTGATGTATACGATGCCATTGAAGCGTGCTCCGATTTGTTGGAACAATTTGGCGGACATAAATATGCAGCAGGCTTATCTATGAAATTAGAAAACCTTGCCGCCTTCCAACAAAAATTTGAAGAAGTAGTTTCTGCAACAATAAAAGATTACATGCTGGTTCCTGAAATTTCCATTGATGCAGAATTAAAATTATCCGACATCACACCAAAATTnnnnnnnnnnTCGAACCATTTGGTCCGGGCAATATGTCGCCAGTATTCATGA
PROTEIN sequence
Length: 489
MEKRWSINSSADEKVVNQLAEELKIEKVLANLLVQRDIKTYDDAKKFFRPSLDGLHDPFLMKDMDIAIARLEKAISAKEKILVFGDYDVDGTTAVSLVYSFLKSLPASEGLVDYYIPDRYTEGYGISFMGIDFAKENNFSLIIALDCGIKANDKVDYANERNIDFIICDHHRPGDTLPKAIAILDPKRNDCNYPFDELCGCGVGFKLVQAYAQKNNIPFSELTQYLDLTAISIASDLVPIVGENRALCYFGLEQINKNPRKGIKAILDLANIKKEVTMNELVFTVGPRINAAGRIETGRNAVALLVSDNHADAKTSGININTSNTERRVLDVSITQHAFSMIDESEELINRKSTVLFHPDWHKGVIGIVASRLIERYYRPTIVLTESNGMATGSARSVKDFDVYDAIEACSDLLEQFGGHKYAAGLSMKLENLAAFQQKFEEVVSATIKDYMLVPEISIDAELKLSDITPKXXXXSNHLVRAICRQYS*