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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_108516_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(879..1751)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VXB7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 289.0
  • Bit_score: 411
  • Evalue 6.90e-112
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 563
  • Evalue 2.00e-157
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 289.0
  • Bit_score: 410
  • Evalue 3.30e-112

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGACAACTTAAAATTTCTAAACAGGTTACCAACAGAGAAACAGTTTCACTTGACAAATATCTACAAGACATATCAAAAGTTGGTTTGATAACCGTAGATGAAGAAATTGACTTAGCAATAAAAATAAGAGGCGGTGATAAAGAAGCTTTAGAAAAATTGACTAAAGCCAATTTGCGTTTTGTCGTTTCAGTTGCAAAACAGTACCAAAATCAAGGATTAACTTTACCCGATTTAATTAACGAAGGTAATATTGGTTTGATAAAAGCAGCTCAACGTTTTGATGAAACCAGAGGTTTTAAATTTATCTCCTATGCTGTTTGGTGGATACGTCAATCCATTATGCAAGCTGTGGCAGAACAAGCACGAATAGTTCGTTTACCATTAAACAAAATTGGAAGCATTTCAAAAATTAACAAAACATTTTCTCAACTTGAACAACTCTACGAAAGAGAGCCGACTAGTGAAGAAGTGGCTGATTTATTAGACATCACTTCTGCCGAAGTAAATGATTCCGTTAAAATATCTGGAAGACATTTTTCTATGGATGCACCTATGTCGTCTGACGAAGATAGCAATAGCATGTTAGATGTTATGCAGGATGAAGAAATTATTTACAATCCAGATAATCATTTAATGCATGAATCACTTCGTAATGAAATTGAACGTTCTCTTTCAACATTATCATACAGAGAAGCAGAAGTTGTTCGATTGTATTATGGAATCAATTGCAAAGCTCCACTAACATTAGAAGAAATTGGGACAGAGTTTGAGTTGACTAGAGAACGTGTTCGACAAATAAAAGAAAAAGCCATTCGACGATTAAAACATAGTTCAAGATGTAAATTATTAATACCTTATTTAGGAAATTAA
PROTEIN sequence
Length: 291
MRQLKISKQVTNRETVSLDKYLQDISKVGLITVDEEIDLAIKIRGGDKEALEKLTKANLRFVVSVAKQYQNQGLTLPDLINEGNIGLIKAAQRFDETRGFKFISYAVWWIRQSIMQAVAEQARIVRLPLNKIGSISKINKTFSQLEQLYEREPTSEEVADLLDITSAEVNDSVKISGRHFSMDAPMSSDEDSNSMLDVMQDEEIIYNPDNHLMHESLRNEIERSLSTLSYREAEVVRLYYGINCKAPLTLEEIGTEFELTRERVRQIKEKAIRRLKHSSRCKLLIPYLGN*