ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_50189_1

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(3..515)

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 357
  • Evalue 1.30e-95
TIGR01212 family radical SAM protein id=3378235 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 164.0
  • Bit_score: 206
  • Evalue 2.60e-50
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 164.0
  • Bit_score: 198
  • Evalue 1.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGCAGTACGCTTTTGAGTTGAATTTTGTGCGATATGGAATTTTTCCAAGAACAATTAATGGACTATATGGCATACTTTTCTCACCTTTTATTCATGGAGATTTTAATCACCTCTTTAACAATGCTGTCCCTTTATTAATTTTAGGAAGTGCTCTTTTTTATTTTTATAAAGAAATTGCACTAAAAGTTACTCTTTGGATTTATTTAATGGTTGGAATTTGGACTTGGGTTTATGCTCGAGAAGCCTATCACATTGGAGCAAGTGGTTTGTTATATGGGCTTTTCTCTTTTTTATTTATAAGCGGGTTTATTCGGAAACACACCCAGCTTATCGCTTTATCTTTTGTGGTTATTTTTCTTTATGGAAGTTTGGTTTGGGGAATTTTACCCATTGATTTGAAAATATCTTTTGAAGGACATTTATGGGGTTTTGTAGCTGGAATTATTTTAGCTTTTTATTATCAAAAACAAGGACCACAAGCAAAAAAACATGTTTGGATAGAAGATGAAGAA
PROTEIN sequence
Length: 171
MQYAFELNFVRYGIFPRTINGLYGILFSPFIHGDFNHLFNNAVPLLILGSALFYFYKEIALKVTLWIYLMVGIWTWVYAREAYHIGASGLLYGLFSFLFISGFIRKHTQLIALSFVVIFLYGSLVWGILPIDLKISFEGHLWGFVAGIILAFYYQKQGPQAKKHVWIEDEE