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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_50189_6

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 2391..3254

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 555
  • Evalue 3.20e-155
RNA polymerase sigma factor rpoD id=4610619 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 287.0
  • Bit_score: 341
  • Evalue 8.70e-91
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 287.0
  • Bit_score: 340
  • Evalue 4.20e-91

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAATTAAAAATTACACAACAAATAACTAAAAGAGAAAGTAAATCTCTTGAAAAGTATTTGCAAGAAGTATCTAGAGAAGGTATGATTACTGCCGATGAGGAAGTTGATTTAGCACAAAAAATTAAAAATGGAGATGAGTTAGCTTTAAATAAATTAGTAAGAGCCAACTTAAGATTTGTTATAAGCGTTGCAAAACAATACCAAAATACAGGTTTAACTTTAGAAGATTTAATTAACGAAGGTAACTTAGGTTTAATTGAAGCTGCAAAGCGATATGACCATACCAAAGGATTTAAATTTATTTCCTATGCCGTATGGTGGATTAGACAAAGTATTTTAAAATCTGCCGCAGATAATTCAAGAACCATTCGATTACCACACAACCGTTTAGGTGAAATTCAAAAAATTAACCGTGCATCAAGTGAATTTGAACAAACAGTTGAAAGAGAACCAACTGATGAAGAATTGGCTGAGATATTAGAGATGGATATTGAAAAAGTTCAGAATTCAAGAAGAATGTCTAAAAAGCAAGCCTCCTTAGATGCTCCTATGGCTAATGACGATGATAACAACAGCTTAATTAGTGTTATTGAAGGTGAAAATACTCCTGCTCCAAATGATTTGTTAATTCATGAATCATTATCAACAGATATCGAAAGAACATTATCTTACCTTAAAGGAATGGAAGCAGAAGTTATTCGCTTATTTTATGGATTGAGTGGAAGAAAAGAAATGACTTTAGAAGAAATAGGCAACCATTTTGGATTAACAAGAGAAAGAATCAGACAAATAAAAGAACGTGGTTTACGAAGACTCAGAAGATTATCCCGAGCAAACAATCTTCAAACGTATTTATAA
PROTEIN sequence
Length: 288
MRQLKITQQITKRESKSLEKYLQEVSREGMITADEEVDLAQKIKNGDELALNKLVRANLRFVISVAKQYQNTGLTLEDLINEGNLGLIEAAKRYDHTKGFKFISYAVWWIRQSILKSAADNSRTIRLPHNRLGEIQKINRASSEFEQTVEREPTDEELAEILEMDIEKVQNSRRMSKKQASLDAPMANDDDNNSLISVIEGENTPAPNDLLIHESLSTDIERTLSYLKGMEAEVIRLFYGLSGRKEMTLEEIGNHFGLTRERIRQIKERGLRRLRRLSRANNLQTYL*