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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_38443_4

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(1820..3277)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK0_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 486.0
  • Bit_score: 590
  • Evalue 1.80e-165
RNA polymerase sigma-54 subunit RpoN/SigL; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 941
  • Evalue 3.50e-271
RNA polymerase sigma-54 subunit RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 486.0
  • Bit_score: 590
  • Evalue 5.10e-166

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1458
ATGGCACTAAAACAATCACTCACTTTTAAACTTCAACAGAAATTATCACCTCAGCAAATTCAATTAATGAAATTGTTACAGCTTCCTACGGTTGCTATGGAACAACGAATTAAAGAAGAGATTGAAAGCAATCCGGCTTTAGATGAGGGAAAAGACGAAGAAGATGAGTTGGATACTGAACAAGAAGATGATTTTGGTAGAGAAGAAATAAGTGATGCCGAAAAAGAATTTGATTTTGATGCTTATATCAGTGATGACACTCCTTCCTATAAATTAAACATTAGCAATCAAAGTAAGGATGATGAAGAAAAACAAGTGCCGTTAAGTGGCGGAGCTAGTTTTCAGGAATTATTAGAAGCACAGTTACTGATGTATAACTTAGAAGATGATGATTATGCAATTGCTGTTCATCTAATTGGTAGTTTGGATGAATCAGGTTATTTGAGAAGAGAACTAAATGCTATTGTAGATGATTTAGCATTTACTCAAAACATTATTACCGAAGAAGCACATGTTGCTAAACTTTTGATGGTTATTCAACATTTTGATCCGCCTGGAGTTGGTGCTAGAACATTGCAAGAATGTTTATTATTACAATTAAAGAAGAAAGATACTCATTCGCTAATTTTTAAAAATGCTATTGAAATAATAGGGAAATACTTTGATGAATTTTCAAAAAAACATTATTCAAAAATCGTTGACAAACTTAACATTTCGGATGAGGATTTAAAAACTACCATTAACGAAATATTAAAGTTAAACCCTAAGCCTGGAAATTCATTAAGCGATGCTAACAAAGTTGTTCAGCACATTGTTCCTGATTTTAATTTAACTATTGAAGATGATGAAATTCTATTAACTTTAAATGGCAGAAATACGCCAGATTTAAAAATAAGTAGAGCTTATAATGATATGATAGAGGGCTATCAAGTTCAAAAAGAAAAACCTTCCAAATCTCAAAAAGATGCGTTAATGTTTGTGAAGCAAAAATTAGATTCAGCCAAATGGTTTATTGATGCAATTAAACAGCGACAAAACACACTTATTGTTACTATGGAAGCCATTATTAACTATCAAAAAGAGTACTTTTTAGCTGGTGATGAAACGCTATTAAAACCTATGATTTTAAAAGATATTGCGGAACAAGTTGAACTTGATATTTCAACAATATCAAGAGTGGTAAATAGTAAATATGTTCAAACCCCTTATGGAACTTTTCTCTTAAAAACATTTTTTTCAGAATCTTTAAGTACAGATAGTGGTGAGGAAGTTTCTACTCGTGAGGTTAAAAAAATTCTTCAAGATGCAATAGAAGAGGAGAATAAGAAAAAACCACTTACAGATGAAAAATTATCACAGTTGTTAAATGAAAAAAGTTATAATATAGCAAGACGAACAATTGCCAAGTATCGAGAACAACTAAATATACCAGTAGCTCGTTTAAGAAAGGAATTGTAG
PROTEIN sequence
Length: 486
MALKQSLTFKLQQKLSPQQIQLMKLLQLPTVAMEQRIKEEIESNPALDEGKDEEDELDTEQEDDFGREEISDAEKEFDFDAYISDDTPSYKLNISNQSKDDEEKQVPLSGGASFQELLEAQLLMYNLEDDDYAIAVHLIGSLDESGYLRRELNAIVDDLAFTQNIITEEAHVAKLLMVIQHFDPPGVGARTLQECLLLQLKKKDTHSLIFKNAIEIIGKYFDEFSKKHYSKIVDKLNISDEDLKTTINEILKLNPKPGNSLSDANKVVQHIVPDFNLTIEDDEILLTLNGRNTPDLKISRAYNDMIEGYQVQKEKPSKSQKDALMFVKQKLDSAKWFIDAIKQRQNTLIVTMEAIINYQKEYFLAGDETLLKPMILKDIAEQVELDISTISRVVNSKYVQTPYGTFLLKTFFSESLSTDSGEEVSTREVKKILQDAIEEENKKKPLTDEKLSQLLNEKSYNIARRTIAKYREQLNIPVARLRKEL*