ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_83514_3

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 1365..1913

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 364
  • Evalue 8.60e-98
RNA polymerase sigma factor id=2157572 bin=GWD2_Bacteroidetes_33_33 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 181.0
  • Bit_score: 267
  • Evalue 1.00e-68
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 185.0
  • Bit_score: 247
  • Evalue 3.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGGAGCATTATTCTGACGAAAAGTTATTGAGCATGTTTCGGGACGAAAGTTCTCGAAATTATGCCTATAACCTTATTGTTAGAAAGTATCAAAAAAAATTATATTGGCACATTCGACGAATGGTTATTGTGCATGAAGATGCAGATGATGTGGTTCAGATTACCTTAATAAAAGCTTGGAAAGGATTGCCAAATTTTAAAGAAGAAGCAAAATTATATACTTGGTTGTATCGTATTGCGACCAATGAATCTTTTACATTTTTAAGCAACAAAAGGAAACGTTTTTTTATACCTATTGTTGACGTTGAGCGAGAATTATCTCAAGCAATAGAAAGTGATGAATTTTATACAGGTGATGAAATTCAGTTAAAATTACAGAAGGCTATTTTAACCTTACCGCAAAAACAACGAATGGTTTTTAATATGAAATATTATGAAGAAATGAAGTATGAAGAAATGGCTGAAATATTATCTACCTCGGTAGGAGCACTTAAAGCATCTTATCATCTCGCAGTAAAAAAAATAGAAAATTTTATAAAAGAAGTTTAA
PROTEIN sequence
Length: 183
MEHYSDEKLLSMFRDESSRNYAYNLIVRKYQKKLYWHIRRMVIVHEDADDVVQITLIKAWKGLPNFKEEAKLYTWLYRIATNESFTFLSNKRKRFFIPIVDVERELSQAIESDEFYTGDEIQLKLQKAILTLPQKQRMVFNMKYYEEMKYEEMAEILSTSVGALKASYHLAVKKIENFIKEV*