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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_32777_4

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 3714..4325

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D3D2 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 202.0
  • Bit_score: 264
  • Evalue 9.60e-68
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 407
  • Evalue 9.80e-111
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 198.0
  • Bit_score: 240
  • Evalue 3.20e-61

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGGCAGAAGAATTAACGCAAGAGTTATCAGAAAAAGCAAAATACGATTATAATTTAGTACGATTAGCGGCAAAAGGAAATCAAACAGCCTATGCTGAACTAATGAAACGTTATAGAGACTCAATCTATTTTATGCTTTTAAGAATGGTTAATAATAAAGATGATGCTGATGATCTTACCATTGAAGCGTTTACAAAAGCATTTAGCAAATTAGACCAATATACTCCAAATTTTGCGTTTAGCACATGGTTATTTAAAATTGCATCAAACAACTGTATTGATTATATAAGAAAACAAAGACAAACTATTGTTTCTCTCGATAGAACTTTTACAGATGACGAAGGAAGCGAAAAAGCCGTTGATATAAAAGAAGAAAATCCTGATCCGGAAGAAAAATATATTATAGACCAAAAAACAAAATTAATGCAGGAAGTGGTTAATAGTTTAAAGCCTCGTTACAGAATGTTAATAGAAATGCGTTATTTTAAAGAATATTCATACGAAGAAATTTCAGAACATCTTGACTTACCTCTTGGCACTGTAAAAGCCCAACTTCATAGAGCAAGAGAATTTCTGTATCATATTCTCAAAACAAAACATCAAACACTCTAG
PROTEIN sequence
Length: 204
MAEELTQELSEKAKYDYNLVRLAAKGNQTAYAELMKRYRDSIYFMLLRMVNNKDDADDLTIEAFTKAFSKLDQYTPNFAFSTWLFKIASNNCIDYIRKQRQTIVSLDRTFTDDEGSEKAVDIKEENPDPEEKYIIDQKTKLMQEVVNSLKPRYRMLIEMRYFKEYSYEEISEHLDLPLGTVKAQLHRAREFLYHILKTKHQTL*