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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_29466_5

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: comp(4393..5772)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000313B797 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 445.0
  • Bit_score: 448
  • Evalue 8.10e-123
TolC family type I secretion outer membrane protein Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 459.0
  • Bit_score: 868
  • Evalue 3.50e-249
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 447.0
  • Bit_score: 458
  • Evalue 1.70e-126

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGGCGCGGACCGTCGAGGCGTCCATGCCGGTCTATTGATCATGAAGCTCTCGCTGAAGAACGCCGTCGTCGTCTCCCTGTGGACCTTGTCGGGCCATGCCTGGTCGGCGGACCTCGTGCAGATCCTGCGCGATGCGTTCGCCCATGACGCCCAATATGCCTCGGCGCGCGCGACGCGCGACGCCGGGCTGGAGGCCCTGCCGCAGGGCCTCGCTGGCCTGTTGCCCACCATCAGCGCCTCCGCATTTACCCAGACGAGCACGCTGGACATCAGCTTCCGCGGCGCCCTGCCCACGTCGAATCGCGAGGGCAACAGCAACGCGATCACGTTCTCGCTGACCCAACCCCTGTTCAACTGGAACAACCTCATGGTGTACCGGGAGGCCGGATTCAAGGCAGCCCAGTCCGAGGCCCAGTTCAGCCAGGCGACCCAGGACCTGATCGTGCGCGTCTCGCAGGCCTATTTCGACGTGCTTGGCTCGCAGGACAGCCTCGCGTTCATCCAGGCCCAGAAGACGGCGATTTCGGAACAGCTTGCGCAGGCAAAGCGCAACTTCGAGGTGGGTACCTCGACCATTACCGACACCCACGAAGCGCAGGCACGCTACGACCTTGCCACTTCGCAGGAAATCGCGGCCCAGAACGACCTGGAGATCAAGAAGCGCGCGCTGCAGCAGATCATCGGCAAGTTCCCCGAGCGACTCGCGCCGATCAAACCGAGCGTGCAGATCAATCCACCGAAACCGGCGGCGATGGAGGAATGGGCCTCTGCCGCCGAATCCCGCAGCTTCCAGGTGCGCGCGCAGGAAGCCGCGGCCGAGGTCGCGACCCGCGAAATCGAGCGCCTGCGCGCCGGGCATCTGCCGACCCTGAACCTGGTCGGAAGCATTGGATACAACTCCCAGAGCGTGAGTACCGCCGGTGCATCGAATGTGCCATCGGACTCGGAAAGCCGGGTCATCGGCCTGCAACTGGCGATCCCGATCTACGGCGGCGGCAACGTCAGCTCGCAGGTACGCCAGGCCATCGCCAACCGCGAAAAGGCGCGGCAGGATCTCGAGTTCAGCCGCCGCTCATCCGCACTGTCGGCGCGCCAGGCCTATCTGGGCGTCACCAACGGCCTGGCGCAGGTCAAAGCGCTCGAGGCAGCCCTCACCTCGAGCCAGAGCGCGCTGGATTCCAACAAGCTCGGCTACGAAGTCGGAGTGCGCATCAACATCGACGTGCTGAATGCGCAGCAGCAGGTCTTCTCGACCAAGCGCGACCTGTCCAAGGCCCGCTACGACACCATCGTCAACGGACTGAGACTCAAGGCCGCGGCCGCATCGCTCGCCGACACCGACATCGAGGAAGTCAACCGGCTGCTCGGCGCCGACTGA
PROTEIN sequence
Length: 460
MGADRRGVHAGLLIMKLSLKNAVVVSLWTLSGHAWSADLVQILRDAFAHDAQYASARATRDAGLEALPQGLAGLLPTISASAFTQTSTLDISFRGALPTSNREGNSNAITFSLTQPLFNWNNLMVYREAGFKAAQSEAQFSQATQDLIVRVSQAYFDVLGSQDSLAFIQAQKTAISEQLAQAKRNFEVGTSTITDTHEAQARYDLATSQEIAAQNDLEIKKRALQQIIGKFPERLAPIKPSVQINPPKPAAMEEWASAAESRSFQVRAQEAAAEVATREIERLRAGHLPTLNLVGSIGYNSQSVSTAGASNVPSDSESRVIGLQLAIPIYGGGNVSSQVRQAIANREKARQDLEFSRRSSALSARQAYLGVTNGLAQVKALEAALTSSQSALDSNKLGYEVGVRINIDVLNAQQQVFSTKRDLSKARYDTIVNGLRLKAAAASLADTDIEEVNRLLGAD*