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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_97780_5

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(5281..5634)

Top 3 Functional Annotations

Value Algorithm Source
type I antifreeze protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 238
  • Evalue 3.50e-60
FmdB transcriptional regulator id=5082109 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 121.0
  • Bit_score: 198
  • Evalue 3.70e-48
putative regulatory protein, FmdB family similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 117.0
  • Bit_score: 156
  • Evalue 4.60e-36

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGCCGATTTATGCCTACAAGTGCGCGTCCTGCGGCCATGCCAAGGACGTGTTGCAGAAGATGTCCGACGATCCGTTGAGCATCTGCCCGGCCTGTGGCCAGGCCAGCTTCCAGAAACAGCTCACCGCGGCCGGTTTCCAGCTCAAGGGCTCGGGCTGGTACGTGACCGACTTCCGGGGTGGCAACGGTGGAACGACCGCGCCCGCGGTGGCAGGTGCCGAAAACGGCGCCGGTGCGGCCGATGGCGCCGCCAAACCCGCCAGCGAGTCCACCGCCAGCCCTGCAGCGGCCAGCCCGGCGGCACCGGCCGCGGCGGCGCCAGCGGCCAGTTCGTCCCCGACGATCTCCACCTGA
PROTEIN sequence
Length: 118
MPIYAYKCASCGHAKDVLQKMSDDPLSICPACGQASFQKQLTAAGFQLKGSGWYVTDFRGGNGGTTAPAVAGAENGAGAADGAAKPASESTASPAAASPAAPAAAAPAASSSPTIST*