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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_155873_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1616..1975)

Top 3 Functional Annotations

Value Algorithm Source
periplasmic linker protein id=5082712 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 111.0
  • Bit_score: 148
  • Evalue 3.50e-33
periplasmic linker protein Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 112.0
  • Bit_score: 148
  • Evalue 4.80e-33
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 124.0
  • Bit_score: 104
  • Evalue 2.10e-20

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGAACGACAAGGCGCTGGTGGTCCCCGAAGAAGCGATCGTGCCGCAGGGCGGCAAGCAGTTCGTGTTCCGCCTGGAGAAAGAAGGCGAGGGCGATGCGCTCAAGCTGGTGTCGCGCCGCACCGAGGTCCAGGTGGGTGTGCGCCAGGGCGCGCAGGTGCAGGTGGTGACCGGGCTGAGCGAGGGCGACACGGTGGTCGTGGCCGGTCAGCAGCGGCTGCAGCGCGATGGCACGGCCGTGCGGGTGGTGGAGATGGGGTCGCCTGAAGCGGGGGCCCGTGAGACGGCTCCGGCGGCTGGCCCAGACGCCGCACCGGCGCCCGCGCCCGCCGGCGCCCGGCCCGCGCCGGCCGCGAGTTGA
PROTEIN sequence
Length: 120
VNDKALVVPEEAIVPQGGKQFVFRLEKEGEGDALKLVSRRTEVQVGVRQGAQVQVVTGLSEGDTVVVAGQQRLQRDGTAVRVVEMGSPEAGARETAPAAGPDAAPAPAPAGARPAPAAS*