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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1..600

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 395
  • Evalue 3.80e-107
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein id=5083734 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 200.0
  • Bit_score: 380
  • Evalue 9.00e-103
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 199.0
  • Bit_score: 347
  • Evalue 3.10e-93

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
TACCCGCTCGCCTACTGGCTCTCCACGCTCTCCGAGCGCAAGGCCAACGTGCTGCTGATCCTGGTGCTGCTGCCGTTCTGGACCTCGGTGCTGGTGCGCATCGCGGCCTGGATCGTGCTGCTGCAGAACAACGGCCTGGTCAACCGGTTCCTGATCTGGCTGGGCGCCACCGATGCGCCCATTCCCCTGCTGTTCAATCGCCTGGGTGTGATCGTCGCCATGGTGCACATCCTGCTGCCCTTTGCCATCCTGCCGCTGTACAGCGTCATGAAATCGGTGCCCTCCAACTACCTGCGGGCCGCCGTGTCGCTGGGCAGCCCGCCGCTGGCGGCGTTCTTCCGCGTCTACCTGCCGCAGACCTACCCCGGCGTGGCCGCCGGTGGTCTGCTGGTCTTCATCACCAGCATCGGCTACTACGTCACCCCCGCCCTGCTCGGTGGCCCGGGCGACCAGATGCTGAGCTACTACGTGGCGCAGTACACCAACGTCGAAGTCAACTGGGGCATGGCCTGCGCGCTCGGTGGCGTGCTGCTGACGGCCACCATGGTGCTGTACGTGCTCTACCGCAAGGTCTCAAAGGCCGAACTGAGCCTGGGTTGA
PROTEIN sequence
Length: 200
YPLAYWLSTLSERKANVLLILVLLPFWTSVLVRIAAWIVLLQNNGLVNRFLIWLGATDAPIPLLFNRLGVIVAMVHILLPFAILPLYSVMKSVPSNYLRAAVSLGSPPLAAFFRVYLPQTYPGVAAGGLLVFITSIGYYVTPALLGGPGDQMLSYYVAQYTNVEVNWGMACALGGVLLTATMVLYVLYRKVSKAELSLG*