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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_1024_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(266..682)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer protein TrbC n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UDD6_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 125.0
  • Bit_score: 190
  • Evalue 1.20e-45
trbC-like protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 190
  • Evalue 3.40e-46
TrbC-like protein {ECO:0000313|EMBL:AKA21949.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 190
  • Evalue 1.70e-45

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Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAACCCTTCGCTTTCCCTGCGCGCTTTTGCCTGTCTGCTGACCCAATCCATCTCTCGACGGATCTCCTCCGCCGGCGTGGCCGGCCTGCAGCGCATCCACCGGTTGGTCCAGCCCGCCCGTCACGGACTGTTTACCGCCGCTGTGATGTTGAGCGTGGCGGGCACTGCCAAGGCGGCCGGTTCCAGCATGCCCTGGGAAGGACCTCTGCAATCCATTCTGGACTCGATCCAGGGCCCGGTGGCCCGCATCGTGGCGGTGATCATCATCATCGCCACCGGCCTGGCGCTGGCCTTCGGCGATACCTCGGGGGGCTTCCGCAAGCTGATTCAGATCGTCTTCGGTCTGTCGATTGCCTTCGCGGCCTCGTCCTTCTTCCTGAGCTTCTTCAGCTTCTCGGGCGGGGCCTTGGTATGA
PROTEIN sequence
Length: 139
MNPSLSLRAFACLLTQSISRRISSAGVAGLQRIHRLVQPARHGLFTAAVMLSVAGTAKAAGSSMPWEGPLQSILDSIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGALV*