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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_1024_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(679..1701)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=3 Tax=Gammaproteobacteria RepID=A0KUP7_SHESA similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 340.0
  • Bit_score: 544
  • Evalue 8.00e-152
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AKC78174.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ca similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 340.0
  • Bit_score: 547
  • Evalue 1.70e-152
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 340.0
  • Bit_score: 544
  • Evalue 2.30e-152

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGCTGCGCACGGCCATGGGGCCGATGATCGCAGCTGCTCTGGAAGACCCGGACGTGGTGGAGGTGCTGCTCAACCCCGATGGATCGCTGTGGCTGGACCGGCTCTCCACCGGACGTGCACCGACGGGCGTGACCTTGTCGGCGGCCGATGGGGAACGCATCATCCGACTGGTCGCGGCCCATGTGGGCGCCGAGGTACACCGGGGCCAGCCTCTGCTGACAGCCGAGTTGCCCGAAACGGGCGAACGCTTCGAGGGTGTTCTGCCCCCGGCTGCGCCGGGCCCGGCGTTCGCGCTGCGCAAGCGCGCCGTGGGCGTGATCCCGCTCGACCGCTACGTGGCCGACGGGATGATGACGGCGGAGCAGGCCGGCTTCCTGCGCCAGGCCGTGCACGAGCGTCAAAACATCCTGATCGCTGGCGGCACCAGCACCGGCAAGACCACGCTGGCCAACGCGCTGCTGGCCGAAATCGCCACCACAGGCGACCGGGTGCTGGTGCTCGAAGACACCATCGAACTTCAATGCGCGGCGCGCGACCACGTGCCGCTGCGCACACGCGCAGGCGCCGTGTCCATGGCCGAGCTGGTGCGCGCCACGATGCGGCTACGCCCCGACCGCGTGGTGGTGGGTGAGGTGCGTGGCGGAGAAGCGCTGGACCTGGTCAAGGTCTGGGGCACCGGCCACCCCGGCGGCATCGCCACCATCCATGCCGGGTCGGCACTCGGTGCGCTGCTACGGCTGGAGCAGCTGATCCTGGAGGTGGCGGTGAACCCGCCGCGTGCGCTGATCGCCGAAGCGGTCAACGTGGTGATCTACATCGCCGGTCGCGGCCGCAAGCGCCACATCGACACGATTGCCCGCGTCACTGGACACGACAGCACGGGCTACCACCTGGTGGCGATGAGCGGGACGCTGGATACACCCTTTCCGGAGCTGCCAGCGCCACCACCACTTGCGCCCTCTTCCACCCCGCCTCCCGTGGTGGATTCCCCTTCCTCAACCCTGCCTGGAGAACTTCCATGA
PROTEIN sequence
Length: 341
MLRTAMGPMIAAALEDPDVVEVLLNPDGSLWLDRLSTGRAPTGVTLSAADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGVLPPAAPGPAFALRKRAVGVIPLDRYVADGMMTAEQAGFLRQAVHERQNILIAGGTSTGKTTLANALLAEIATTGDRVLVLEDTIELQCAARDHVPLRTRAGAVSMAELVRATMRLRPDRVVVGEVRGGEALDLVKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIYIAGRGRKRHIDTIARVTGHDSTGYHLVAMSGTLDTPFPELPAPPPLAPSSTPPPVVDSPSSTLPGELP*