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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_64103_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2..166

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=5079965 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 113
  • Evalue 9.60e-23
tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 54.0
  • Bit_score: 109
  • Evalue 3.90e-22
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 54.0
  • Bit_score: 113
  • Evalue 1.30e-22

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Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ACCCTGCGCCACGCCTTCGCCACCCACCTGCTCAACCACGGCGCCGACCTGCGCGCGGTGCAGATGCTGCTGGGCCACGCCGACATTTCCACCACCACGATCTACACCCACGTGGCGCGCGAACGGCTCAAGAGCATTGTGGCGCAGCACCACCCGCGGGGCTGA
PROTEIN sequence
Length: 55
TLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKSIVAQHHPRG*