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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_151157_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2088..3527)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate/d-alanyl-d-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RifCSPlowO2_12_Burkholderiales_6 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 479.0
  • Bit_score: 938
  • Evalue 3.80e-270
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=5080304 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 480.0
  • Bit_score: 780
  • Evalue 7.20e-223
UDP-N-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate/d-alanyl-d-alanyl ligase similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 467.0
  • Bit_score: 555
  • Evalue 1.10e-155

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGACCATGGCCCAGTTGTTGACCCGACTCAGCGGCGCACGGGCCGTGGGCACGGTGGACGCCCCCATCGGCCGTGTGCACTCCGACACCCGCAGCCTGCAGCCGGGCGATCTGTTCGTGGCGCTCAAGGGCGAGCGCTTCGACGCGCACGACTTTCTGCCGCAGGCGCGCGCGCAAGGCGCTGTGGCCGCCATCGCCCACACCGGGTTGGCGCAGGCCGGCCTGCCCGGCGTGGAAGTGCCCGACACGCGGCTGGCACTGGGTGAACTGGCGCGCCTGTGGCGCGAGCAGTTCAGCCTGCCGCTGATCGCCGTGACCGGCAGCAACGGCAAGACCACGGTGACGCAGATGGTGGCGTCCATCCTGCGCGCGGCCGCGGGCGACGCCGCCCATGCCACGCAGGGCAATCTGAACAACGATATTGGCGTGCCGCTCACGCTGCTGCGCCTGCGCCCGGACCACCGCCTCGCGGTGATCGAGCTGGGCATGAACCACCCCGGCGAAATCGCCTACCTCGCCGCGCTCACCCGGCCCACCGTGGCGCTGGTGAACAACGCCCAGCGCGAACACCAGGAATTCATGGCCACGGTGGAAGCGGTGGCGCGCGAAAACGGCCAAGTGATCGCGGCCCTGCCCGGGGACGGCGTGGCGGTGTTCCCCAGCGACGACGACCACACCGCGGTCTGGCGCGAACTGGCCGCGGGCCGGCGCGTGATGACCTTCAGCGACGGCGATGCAACGGCCGACGTGCATGCCCTGCAGGCCGACTGGCGCGACGGCGCCTGGGCCCTGCGCCTGGCCTCCCCCGCCGGGGAGCTGGCCTGCCGCCTGCGCATCGCCGGGCGGCACAACGTGCGCAACGCGCTCGCGGCCACCGCGTGCGCCCTGGCTGCGGGCGTGGCGCTGGCCGACATCGGTCGTGGGCTCGACGCCTTCGAGCCGGTGGGCGGGCGCTCGCGCGCGCTCAGTTTGCCGCTGGCCGACCGCGCCGTGACCCTGATCGATGACACCTACAACGCCAACCCGGACTCGGTGGTCGCGGCCATCAACGTGCTGGCCGAGCTGCCCGGCCCACGCCTGCTGGTGCTGGGAGACATGGGCGAGGTGGGTGAACAGGGCCTGGCGTTTCACCTCGAAGTGCTGCGCCATGCGCAGGCCCGCGGCATCGAGACCGTGCACTGCGCCGGGGACTGGATGCACAAGGCCTGCGCCGCGCTGCGCGCCGCGGGCGAGCCTGCGCCCACGCACTGGGACGACGTTGCCGCCCTGGCCGGCCATGTGAGTGCGGCCGTGGCCGCGCCTGGCGCATCGGCGCTGCGCAGCGTGCTCGTCAAAGGCTCGCGCTTCATGCGCATGGAGCGCGTGGTCCAGGCCCTGCAGGCGCTGGCCAGCGCACCCCCAACACAAGAACAAAAGGACGCATCGCATGCTGCTTAG
PROTEIN sequence
Length: 480
MKTMAQLLTRLSGARAVGTVDAPIGRVHSDTRSLQPGDLFVALKGERFDAHDFLPQARAQGAVAAIAHTGLAQAGLPGVEVPDTRLALGELARLWREQFSLPLIAVTGSNGKTTVTQMVASILRAAAGDAAHATQGNLNNDIGVPLTLLRLRPDHRLAVIELGMNHPGEIAYLAALTRPTVALVNNAQREHQEFMATVEAVARENGQVIAALPGDGVAVFPSDDDHTAVWRELAAGRRVMTFSDGDATADVHALQADWRDGAWALRLASPAGELACRLRIAGRHNVRNALAATACALAAGVALADIGRGLDAFEPVGGRSRALSLPLADRAVTLIDDTYNANPDSVVAAINVLAELPGPRLLVLGDMGEVGEQGLAFHLEVLRHAQARGIETVHCAGDWMHKACAALRAAGEPAPTHWDDVAALAGHVSAAVAAPGASALRSVLVKGSRFMRMERVVQALQALASAPPTQEQKDASHAA*