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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_216747_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2..385

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 237
  • Evalue 8.40e-60
uncharacterized LOC100486403 id=5081722 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 128.0
  • Bit_score: 200
  • Evalue 1.40e-48
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 123.0
  • Bit_score: 163
  • Evalue 5.30e-38

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GACGTTCTGCTGGTGGTGCTCATTTTCCTGATGCTCACCACCACCTACAGCAAGTTCACCGAGCTGCAGGTCAACCTGCCGGTGGCCGACGCGCAGGCACCGCGTGAGAATCCCAAGGAAGTGATCGTCTCGGTCAGCAACGATGGGCGCTACTCGATCAACAAACAGCTGCTCGAAGGCAACGGGGTCGAGATGCTCACGCGCGCGCTGTCGCTGTCGGCCCAGGACAACCGCGAGGCGGTGGTGGTCATCAGCGCCGATGCGGCGGCCACCCACCAGTCCGTCATCAACGTGATGGACGCTGCACGGCGCGCAGGCCTGGTTCAGATCACCTTTGCCACCCAGCAGTCCTCCGGCGCCAAGGCTGCCCGCGGCAAGTCCTGA
PROTEIN sequence
Length: 128
DVLLVVLIFLMLTTTYSKFTELQVNLPVADAQAPRENPKEVIVSVSNDGRYSINKQLLEGNGVEMLTRALSLSAQDNREAVVVISADAAATHQSVINVMDAARRAGLVQITFATQQSSGAKAARGKS*