ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_55052_5

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 6321..6905

Top 3 Functional Annotations

Value Algorithm Source
Methylation n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V22_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 188.0
  • Bit_score: 194
  • Evalue 1.20e-46
methylation; K08084 type IV fimbrial biogenesis protein FimT Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 392
  • Evalue 4.10e-106
methylation similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 188.0
  • Bit_score: 194
  • Evalue 3.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAACACCCGCGAATCACTCGACCGGCGCGTTATCAGGCGGGGAAATGGTGTCTGCGAGGGTTCACATTGGTCGAATTGATGGTCACGCTGGCCCTGGTCTCCGTGCTCATGATGATCGCGGTACCGAGCTACATCAGTTTCTCCCGCAATTCCCAGTTGTCCGATGTGATAAGCAATTTCGTGGCCGGCTTTAATGCAGCACGCTCAAATTCCATGAAACTCGGTCTCAACACATTGATGATTCCCCAAAATACCAGCACTGGTTGGAGCTCGGGCTGGATGATCTTCACCGACACAAACTGGGACAACAGCTATACGGCCGGGACAGACACCTTGATTGCGGAGCACCCGGCAATCCCAGCGAGAGCGGGTATCACGGTGACGGTGATCGGGGATTCAAGCTCACCCAACAGCTTGGCGGCAAACTACCTCTTGTTCAACGGCAGCGGTTTTCCAAAGCTGAAAAGTGGTAATTTCAGCAATGGCAGCATTGTGTTCAATAACGTAGATCGCTCCACCACCATCATCTATAGCCAGGCCGGTCGCATACGCTCATGCAAGACAGGGGACAGCGGTTGTTGA
PROTEIN sequence
Length: 195
MKHPRITRPARYQAGKWCLRGFTLVELMVTLALVSVLMMIAVPSYISFSRNSQLSDVISNFVAGFNAARSNSMKLGLNTLMIPQNTSTGWSSGWMIFTDTNWDNSYTAGTDTLIAEHPAIPARAGITVTVIGDSSSPNSLAANYLLFNGSGFPKLKSGNFSNGSIVFNNVDRSTTIIYSQAGRIRSCKTGDSGC*