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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_68531_11

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(8498..9091)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 401
  • Evalue 8.90e-109
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5082610 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 189.0
  • Bit_score: 316
  • Evalue 1.60e-83
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 191.0
  • Bit_score: 288
  • Evalue 1.70e-75

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCACCATGCCCCACCCGACCGAGCCCGACTACGAACAACAACTGGTCGCGCAGCGCAGTTACCTGATGCGCTTCGCGCGCCTGCAGTTGCGCAACGACGCCTGGGCCGAGGACGCGGTGTCCGAGACGCTGCTGGCCGCGCTGAGCAAACCCCAGGCCTTCGAGGCGCGTTCGCAGCTCAAGACCTGGCTGGTGGGCATCCTCAAGCACAAGATCATCGACTTCCTGCGCTCGCGCAAGCGCGAGGTCTGCCTGGCCAGCGACAGCGAGGACGACGGCGCCGACCCGCTGGAGCTCATGGCCTTCAGGGCCGACGGGCACTTCGCCGAGAAGCCGGCCGAATGGGGCGACCCGGAGCAGGACCTCAAGAGCCGGCAGTTTTTCGCGGTGCTCGAAGCCTGCACCGACAAGCTGCCCGCCGTCCAGGGGCGGCTGTTTCTCATGCGCGAATGGCTGGAGCTCTCCAGCGAGGAGATCTGTAAGGAACTGGCGCTCACGCCGACCAACCTGTACGTCCAGCTGCACCGCGCCCGCCTTCGCCTGCGCGAGTGCCTGGAACTGAACTGGTTTGCCCAACCCCGGACACCATGA
PROTEIN sequence
Length: 198
MSTMPHPTEPDYEQQLVAQRSYLMRFARLQLRNDAWAEDAVSETLLAALSKPQAFEARSQLKTWLVGILKHKIIDFLRSRKREVCLASDSEDDGADPLELMAFRADGHFAEKPAEWGDPEQDLKSRQFFAVLEACTDKLPAVQGRLFLMREWLELSSEEICKELALTPTNLYVQLHRARLRLRECLELNWFAQPRTP*