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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_214724_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1..255

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 84.0
  • Bit_score: 175
  • Evalue 4.40e-41
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] id=5080319 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 85.0
  • Bit_score: 161
  • Evalue 4.80e-37
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 82.0
  • Bit_score: 137
  • Evalue 1.60e-30

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
AACCGCGGCCAGGTGCGCCTGCGGGTGTACGAGCGCGGCGCCGGCGAGACGCTGGCCTGCGGCACCGGCGCCTGCGCCGCCGTGGTGGCCGGCATCCGCCTGGGCCTGCTGGATGCGAAGGTCGACGTGCACACGCACGGCGGCGTGCTCACCATCGAATGGGCCGATACGCCGGCCCACGACGCCCCGGTTTTCATGACCGGCCCGGCCACCACCGTGTTCGAGGGCGAGATCAACGTGCCCGACCTCGCCTGA
PROTEIN sequence
Length: 85
NRGQVRLRVYERGAGETLACGTGACAAVVAGIRLGLLDAKVDVHTHGGVLTIEWADTPAHDAPVFMTGPATTVFEGEINVPDLA*