ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_46429_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2124..3725)

Top 3 Functional Annotations

Value Algorithm Source
NifA subfamily transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 533.0
  • Bit_score: 1035
  • Evalue 0.0
NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein id=5083613 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 534.0
  • Bit_score: 998
  • Evalue 2.40e-288
NifA subfamily transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 544.0
  • Bit_score: 803
  • Evalue 4.20e-230

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGCCGCCCCACCACACCGACCCCGACACCCCCGGCACCGACTGGCACGCCCAGGAGCTGTTGCTCATGCGCGAAGTGATGAAGCTCGTCGGCCGCAGCCTGGCGCCGGCTTTTGTGCTGCGCGAGATGCTGCATTTGATGAGCGAGTTGCTGGGCCTGAACCGCGGGCGCATGGTGCTGGCCGACGACGCCGCGGCGGGCGCGGAGCGCACCGCCTCCATCCGCCACGCCTACGGCCTCACCGCCGAAGAGGCAGCGCGCGGCGTGTTCCGCTGGGGCGAGGGCATCACCGGCCGGGTGCTGGCCAGCGGCTTGCCCGCCATCGTGCAGGACGTGGACGCCGAGCCGCTGTTCCTCTTTCGCACCGTGGCGCGCGCTCAGTTGCCGCCGCAGACCGTGGCCTACATCGCGCTGCCGATCGAGGTGAACGGCGCCACCGTGGGCGTGCTGGGCTGTCACCGCATCCGCAGCCGCCAGCGGCACCTGAACGACGACCTGGCGCTGCTGCGCATCCTGGCCACGCTGGCCGGCCAGCTGCTGCAGCTGGAGCAACTGGTGGCCGAGGAGCGGCGCCAGCTGGCCGCGCGCAACGAGGCGCTGGAGCGCGCGATCGACCTGGGCAGCGCGCGCTACGGGCTGATCGGCCGCTCGCCCGCGCTGCTGCGGGCGCTGGGCGAGCTGGAGCGCGTCTCGCAGTCGCAGGCCACGGTGCTGCTGCTGGGCGAGTCGGGCACCGGCAAGGAGCTGTTTGCCCGCGCGGTGCACCTGGCCAGCGGCCGGCGCGACCAGCCGTTCATCAAGGTCAACTGCTCGGCGATTCCGGACACGCTGTTTGAGAGTGAGCTGTTCGGCTACGAACGCGGCGCCTTCACCGGCGCGAGCACGGCGCGCGCCGGCTGGTTCGAGCAGGCCAACAGCGGCACGATTTTTCTGGACGAGATCGGCGAACTGCCGCTGGCGATGCAGAGCAAGCTGCTGCGCACCCTGCAGGAAGGCACGCTGGTGCGCCTGGGCGGCACGCGCGAGATCCGCATCGACGTGCGGCTGGTGGCGGCCACCAACCGCGACCTGGCGCAGGAAGTGCAGGCCGGGCGCTTCCGGCAGGACCTGTATTACCGGCTCAACGTGATCCCGATCCGCCTGCCCAGCCTGCGCGAGCGGCGCGAGGACGTGCGCGCGCTGGCGCTGCATTTCGTGAGCCGCGCCAACCAGGCGCACCAGCGCAACGTCAACCTCGCACCCGACGCGCTAGCGCGGCTGGAGGCGCACGACTGGCCCGGCAACATCCGCGAGCTGGGCAACCTGATCGAACGCCTGGTGCTGCTGGCCGACCACACGCTGGTGACGGCCGCGGCGCTGGAGCGCTTCATGCCCGAGGCGCTGGGGGGCGCCCGGCCCGCGCCCGCCTCGGCCCCGATCCCGCCGGCCCTGCCCGCAGGCGCCGGGCTGGTGCGCGACTACCAGAGCGCCACGTCACACGACGCGCAGACCTTGCAGGACGCGCTGACCCGCCACCAGGGCAACCAGTCTCGCGCGGCGCAGAGCCTGGGGCTGACGCTGCGGCAGTTCGGGTATCGGCTGCGCAAGGCGGGGTTGCGGTGA
PROTEIN sequence
Length: 534
MPPHHTDPDTPGTDWHAQELLLMREVMKLVGRSLAPAFVLREMLHLMSELLGLNRGRMVLADDAAAGAERTASIRHAYGLTAEEAARGVFRWGEGITGRVLASGLPAIVQDVDAEPLFLFRTVARAQLPPQTVAYIALPIEVNGATVGVLGCHRIRSRQRHLNDDLALLRILATLAGQLLQLEQLVAEERRQLAARNEALERAIDLGSARYGLIGRSPALLRALGELERVSQSQATVLLLGESGTGKELFARAVHLASGRRDQPFIKVNCSAIPDTLFESELFGYERGAFTGASTARAGWFEQANSGTIFLDEIGELPLAMQSKLLRTLQEGTLVRLGGTREIRIDVRLVAATNRDLAQEVQAGRFRQDLYYRLNVIPIRLPSLRERREDVRALALHFVSRANQAHQRNVNLAPDALARLEAHDWPGNIRELGNLIERLVLLADHTLVTAAALERFMPEALGGARPAPASAPIPPALPAGAGLVRDYQSATSHDAQTLQDALTRHQGNQSRAAQSLGLTLRQFGYRLRKAGLR*