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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_181388_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1267..1518

Top 3 Functional Annotations

Value Algorithm Source
hfq; RNA-binding protein Hfq; K03666 host factor-I protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 165
  • Evalue 4.50e-38
hfq; RNA-binding protein Hfq; K03666 host factor-I protein id=5082676 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 8.00e-37
hfq; uncharacterized host factor I protein similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 149
  • Evalue 4.00e-34

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGAGCAATAACAAAGGCCAGCTCTTGCAAGACCCCTTTCTGAACCAGCTTCGCCGGGAACACGTTCCTGTGTCGATCTATCTGGTCAACGGCATCAAGCTCCAGGGTCAGATCGAGTCGTTTGACCAGTACGTCGTGTTGCTGCGCAACACGGTCACGCAAATGGTCTACAAACACGCCATTTCCACCATCGTGCCGGGTCGTCCGGTGCAATTTTCCGCCGCTGGTGCGGACGAGTCCGCTGCTTCTTGA
PROTEIN sequence
Length: 84
VSNNKGQLLQDPFLNQLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTIVPGRPVQFSAAGADESAAS*