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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_38710_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(3380..4315)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KBI8_THASP similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 308.0
  • Bit_score: 502
  • Evalue 3.20e-139
integrase catalytic subunit Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 311.0
  • Bit_score: 642
  • Evalue 3.60e-181
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 308.0
  • Bit_score: 502
  • Evalue 9.00e-140

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGTCGGACCCAGGCCTCCTCGCGCGGTGCGAGTGCGCCCACCGCTGGCCTTGGATGCGCAAGAGAGCACGCTGCTGCTGGACACTTTGAACAGCGAACGCTTCGCCGACACCGCCCCTGCGGCCGTGCACGCCACGCTGCTCGACGAGGGGCGATACCTGGGCTCGGTGCGCACCATGTACCGCCTGCTGAACACCCAAGGCGGCTCGTGCGAGCGTCGCCGCCAGCTCACCCACCCGGCCTACGTCAAACCCGAACTGCTGGCCAGCGCTCCGAACCAGATCTGGTCCTGGGACATCACCAAGCTGAAAGGGCCGGCCAAATGGACCTGCTTCCATCTGTACGTGATCCTGGACATCTTCAGCCGCCACGTGGTGGGCTGGATGCTCGCCGAGCGCGAGAGCGCCGATCTGGCCGAGCAGCTGATCGCCGACACCGTCTCGCGCCACGACGTGCAGCGCGGCATGCTCACGCTGCACGCCGACCGGGGGGCGGCCATGCGCTCCAAGCCGGTGGCCGCCTTGCTGGTGGAGCTGGACATCGCCAAGAGCCACAGCAGGCCGCACGTCTCGGACGACAACCCGTATTCGGAGTCGCAGTTCAAGACCATGAAGTACCGGCCTGACTTCCCGGCGCGGTTCGGCTGCATCGAGGACGCTCGGCTCCACTGCCAAGCATTCTTCTCTTGGTACAACACCGAGCACCGGCACTCGGGCATCGGCTACATGACGCCGCAAGCGGTGCACTACGGTCAGGCACCGGCCCTGCGCGATGCGCGTCAGGTCGCGCTGGATGCCGCGTTCCTCGCGACACCGAAGCGCTTCAAGGGCCGTCGTCCCAAACCCCATGCGCTGCCGACCGCAGCCTGGATCAACCCACCACCATCGGAGGCCAACGTCCAGAGAACAACCCAGCACTGCGCAGTAAATTTATGA
PROTEIN sequence
Length: 312
MVGPRPPRAVRVRPPLALDAQESTLLLDTLNSERFADTAPAAVHATLLDEGRYLGSVRTMYRLLNTQGGSCERRRQLTHPAYVKPELLASAPNQIWSWDITKLKGPAKWTCFHLYVILDIFSRHVVGWMLAERESADLAEQLIADTVSRHDVQRGMLTLHADRGAAMRSKPVAALLVELDIAKSHSRPHVSDDNPYSESQFKTMKYRPDFPARFGCIEDARLHCQAFFSWYNTEHRHSGIGYMTPQAVHYGQAPALRDARQVALDAAFLATPKRFKGRRPKPHALPTAAWINPPPSEANVQRTTQHCAVNL*