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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_55419_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2500..3999)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS71_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 485.0
  • Bit_score: 624
  • Evalue 1.20e-175
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 483.0
  • Bit_score: 956
  • Evalue 1.80e-275
rpoN; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 485.0
  • Bit_score: 624
  • Evalue 3.30e-176

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
GTGTTGCGGTGGGTCGGGTCCAACCCACCCAGCCACGAGGAGGTCTCCGTGATCCACTTGGACTTGCGCGCCGACCAGCGCCACAGCCAGACCCTGTCGCCCCGACTTCAACACGCCGTGCGCCTGCTGCAGATGTCGTCTCTCGACTTCGGCCTCATGGTGCGGGACACCCTGGGAAGAAACCCCTTCCTGGAGTCGGATGAAGCCATCGACGATGCCGACGGGCTCGACGCCGAGGCGGTGGCCCATGCCCCACCCGGTGACGCTGCCGCCCTCGCTGATGCGGGCACCCAGACCGTGCCCGAATCGCCAGAGGAGGGCGTGGAAAGCGACCGCGACCTCTGGCATGCCGATGCGGCCGCTGGCACCCGGCCGTCTTCGGCCGGCGGCGAGATCTCGGCGCTGGACCTGACGGTGGCCGAGCGTTCACTGAGCATGCAACTGCACAGCCAGCTCAACACCATGCCGCTGTCCGAGCGCGACCTGACCCTGGCGCAGGTGATCGTGGAATCGCTGGACGACGACGGCTACCTGCGCACACCGTTGTGCGAGCTGATCAACGTCGTGCCGATGGACCCGCCGGTGGAACTGGTGGACCTGCAGATCGCGCTGAAGCTCGTTCAGTCGCTGGAGCCCGCGGGCGTGGGGGCGCGCTGTGTCGCGGAATGCCTGGAGCTGCAGTTGCACGAGATCGGGTGTGGGGACATGCGGGCCATGGCCCACACCATCGTCACCGAACACCTCGGCGCGCTGGCCGCCCGCGACATCACCAACCTGGCCCGCCGGCTGGGCAGACCCACCGCGGAGGTGGAAGCCGTGTGCGACCGCATCCGCCGGCTGGCCCCCCGGCCGGGCTGGCGTTGCGGCTCTTCGCACGCCCCCTATGTGGTGCCCGATGTGATCGTGAAGAAGATCCGCGGCGAGTGGACGGTGCGGCTCAACCCGGCCATCGTGCCGCGGGTCAGGTTCAACCAGGTTTACGCGGATCTCTACCAGCGCCACCGTTCCGGTGAAAACAGCGACATCGGCGCCCAGCTGCAGGAGGCGCGCTGGACGGTGCGCAACGTTGAGCAGCGCTTCACGACCATCCACGACGTGGCCCAGGCCATCGTGAAACGACAGCGCCACTTCTTGGAGTTCGGGCCGATGGCCATGAAGCCGCTGGGCCTGCGCGAGATCGCCGACGAGATCGGCGTGCACGAGTCCACCGTCTCGCGCGTGACCAACAACAAGTACATGGCCACGCCCCGAGGGGTGTTCGAGCTCAAGCACTTCTTCTCACGCGCCATGGCCTGCGCCAATGGGCGGGGATGCTCCGGCACCGCGATCCGGGGCCTGATACAGGACATCCTCGAAGCCGAGTCCGCCGACATGCCCTTGTCCGATGCGGAGATCACGCGCCAGCTGGCGCAGCAGGGGCTGGTGGTGGCCCGGCGAACCGTCACCAAGTACCGGCAGATGCTGCGCATCGAGGCGGTGGGCCGGCGGCGTCGGCATTGA
PROTEIN sequence
Length: 500
VLRWVGSNPPSHEEVSVIHLDLRADQRHSQTLSPRLQHAVRLLQMSSLDFGLMVRDTLGRNPFLESDEAIDDADGLDAEAVAHAPPGDAAALADAGTQTVPESPEEGVESDRDLWHADAAAGTRPSSAGGEISALDLTVAERSLSMQLHSQLNTMPLSERDLTLAQVIVESLDDDGYLRTPLCELINVVPMDPPVELVDLQIALKLVQSLEPAGVGARCVAECLELQLHEIGCGDMRAMAHTIVTEHLGALAARDITNLARRLGRPTAEVEAVCDRIRRLAPRPGWRCGSSHAPYVVPDVIVKKIRGEWTVRLNPAIVPRVRFNQVYADLYQRHRSGENSDIGAQLQEARWTVRNVEQRFTTIHDVAQAIVKRQRHFLEFGPMAMKPLGLREIADEIGVHESTVSRVTNNKYMATPRGVFELKHFFSRAMACANGRGCSGTAIRGLIQDILEAESADMPLSDAEITRQLAQQGLVVARRTVTKYRQMLRIEAVGRRRRH*