ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_25305_4

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1700..3412

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 570.0
  • Bit_score: 1076
  • Evalue 0.0
type II secretion system protein; K02453 general secretion pathway protein D id=5080172 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 571.0
  • Bit_score: 1076
  • Evalue 0.0
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 555.0
  • Bit_score: 437
  • Evalue 5.00e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGCACCACTTCAAGATCTCCATGTTCAAGCCCGGAATGGCCACCACCACCGCGATTGTTTCGGCAGCCTTGCTGGGCGCCTGCGTGGCGCCGCCGCCCCAGAGCGCCAAACACCTGGGCGACCCCGACGTCGATTCCTTGAAGCGCATGCAGGAGGTGACACGGGCCGAGTCCGCGAAGCTGCTGGCCCAGCAGGAGCAGATCCTGCGGGAGATGCGCCGCACCGCGGCGGCCAAGCCGCTGGAGCCCGCGGCCCCCACCTACGACCCGCTGGAGGGCAAGACCATCAGCGTGGCCGTGTCCAACGGCAACATCAGCCAGATCCTCACGGCGTTCGCCGACGCGGCCAAGGTCAACCTCATCGTCGAGCCGGCGGTGGTGCAGCAAGGCGCGCTGACCGACATGTTCCTCAAGGACGTGTCGCTGCGCGAGGCCTTCAACGAGCTGCTGCGCAGCTACGACGTGGCCGGTGAAATCCGCAACCAGACCCTGCGCGTGAAGCTGCACGAAGAGAAGTTCTTCGCGATGGACTTCCTCAACATCAACACCCAGATGTCACTGAACTCGGGCGGCAACGTGTTCGGCTCCAACTCCACCGGCGCCAACTCCGCGATCTCGGGCAGCCTGTCCATGAGCGCCGCGGCCGGCAGCCGCGCCGACCCCTACACCGAGATCGAGAACAACCTCAAGACCATCCTGGGCGAGGCCCGCCCGCCCGCGGTGGACCCGGCCGCCGCGGCCCGGGGCAACCAGGACCCGACCCAGGTGGTGCAGCCCAACCAGCAGCACGGCTTCACGCTGAACCGCACCTCCGGCACCCTGTTCGTCAAGGCCCGCCCGTCGCAGATGCGCTCGGTGGAAAAGCTCATCAAGAACACCCAGGACATGCTGACCAAGCAGGTCTACATCGAGGCCCAGCTGATCGACGTGACGCTCAGCGACGGCTACGAGTTCGGCATCGACTGGACCCAGCTGCGCAGCCGCCTGGCGCTGAACTTCGGCTCCAGCGCGCTGGAACTGGCCGGTGGCGCGGCCAGCCTGCCGAACTCATCGCGCACGCGCAACTACCCCGCGAGCAGCCTGACCATTCCCTCCCGGCTGGTCGGGCCGGGCACGGGCCAGACCGGTGGCGGCGTGGCCTACCAGGACAGCAGCGGTTCGACCGTGATCAACGCCCTGCGCTCGTTCGGCAACCTGCGCATCCTCTCCAACCCGAACATCCAGGTGCGCAACGGCACCCCCGCGATGCTGTCGGTGGGCACCAGCCAGCGCTACGTGTCCAAGTCGAGCTCGGCAGAGAACAACATCGGCGGGGGCGCGACCACCACCTCGTCCGAGGTGCAGACCGACGCCGTGTTCTCCGGCGTGATGGTCGGCGTGCTGCCCATGATCCGCGAGGACGGGCGCATCGAGCTGCTGATCAACCCGGTGCAAAGCGACGTGGACCCCTCCAGCCTGGCCCTGGTCGAGGTGAACGACTCCAACCGCGTGAGCCTGCCCCAGGTGGCCTACAAGGGCCTCACCACCACCCTGAACGTGAACGATGGCGACGTGGTCGTGGTCGGCGGCCTGATCGACCAGAAGAGCGGCAACAACAACGGCGGCCTGCCCTTCCTGTCGGACGTGCCTTTCTTCGGCAAGCTCGTCACCAAGGAAAACACCAGCCAGTCCGCCCGCGAACTCATCGTCGTGCTGCGTGTTCGCCTCCTATGA
PROTEIN sequence
Length: 571
MHHFKISMFKPGMATTTAIVSAALLGACVAPPPQSAKHLGDPDVDSLKRMQEVTRAESAKLLAQQEQILREMRRTAAAKPLEPAAPTYDPLEGKTISVAVSNGNISQILTAFADAAKVNLIVEPAVVQQGALTDMFLKDVSLREAFNELLRSYDVAGEIRNQTLRVKLHEEKFFAMDFLNINTQMSLNSGGNVFGSNSTGANSAISGSLSMSAAAGSRADPYTEIENNLKTILGEARPPAVDPAAAARGNQDPTQVVQPNQQHGFTLNRTSGTLFVKARPSQMRSVEKLIKNTQDMLTKQVYIEAQLIDVTLSDGYEFGIDWTQLRSRLALNFGSSALELAGGAASLPNSSRTRNYPASSLTIPSRLVGPGTGQTGGGVAYQDSSGSTVINALRSFGNLRILSNPNIQVRNGTPAMLSVGTSQRYVSKSSSAENNIGGGATTTSSEVQTDAVFSGVMVGVLPMIREDGRIELLINPVQSDVDPSSLALVEVNDSNRVSLPQVAYKGLTTTLNVNDGDVVVVGGLIDQKSGNNNGGLPFLSDVPFFGKLVTKENTSQSARELIVVLRVRLL*