ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_2661_4

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(3362..4057)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6B4_9NEIS similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 214.0
  • Bit_score: 142
  • Evalue 6.30e-31
lytic transglycosylase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 477
  • Evalue 8.80e-132
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 219.0
  • Bit_score: 140
  • Evalue 5.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCATCTGCCGCTGTGGTCCTGCCACAGGAATCCACCCGTGCCCCACAGAGTTCTGGTGGGAATGGGTCTGGCCCTGACTGCAATGCTCCTGAGTGGCGTGGGGCATGCCCAGACCTACGTCAAGATTGACCACCAAGGGCAGCCCCATTGGGCCAGTCACCCGACAGGGCCCGACTACCAGCTCACGCAGATTGGCCCCATAAAACCACCGGGCTCGAATCCAGCAGCGGAAGCTAAGCGCGACCAACCCCTTGCGCAGCGGCGAGCCTTGATCGAGGCCCAGGCGGTCAGGCCTCTGGTCGAGCGCATCAGCCAGCGGCATGGCATGGATCCGGCCCTGGTGCTGGCCTTGATCGATGTCGAGTCGTCCTTCAACCCACGCGCGGTTTCGCCCAAGGGTGCAAGGGGCCTGATGCAGCTGATGCCAGACACCGCGAGGGCCTATGGCATGCGAGACCCACGCGAGTTGCATGTGCCCGAAAAGAACCTGGACTTCGGCATTCGCCACCTCAAAGACCTGCTCCAGGCCCACAACAACAATTGGGCGCTCACCCTGGCCGCCTACAACGCGGGACGCAACGCGGTGCAGCGTCATGGCATGCGGATTCCCGCCTACAACGAAACCCTTATCTATGTCCCCTCCGTCCTCGCCCGAGTGGATCGCCACCGTGTGCGGCCGAGTCAACCCGATTGA
PROTEIN sequence
Length: 232
MHLPLWSCHRNPPVPHRVLVGMGLALTAMLLSGVGHAQTYVKIDHQGQPHWASHPTGPDYQLTQIGPIKPPGSNPAAEAKRDQPLAQRRALIEAQAVRPLVERISQRHGMDPALVLALIDVESSFNPRAVSPKGARGLMQLMPDTARAYGMRDPRELHVPEKNLDFGIRHLKDLLQAHNNNWALTLAAYNAGRNAVQRHGMRIPAYNETLIYVPSVLARVDRHRVRPSQPD*