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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_29964_8

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(5096..5662)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 374
  • Evalue 1.10e-100
RNA polymerase, sigma-24 subunit, ECF subfamily id=2123593 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 1.70e-71
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 188.0
  • Bit_score: 272
  • Evalue 1.20e-70

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Taxonomy

R_Gallionellales_60_31 → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TCCAACCGCACCGAATTATCCCAATTTCTCAGTTCGGTAGAACGCCGCGCATACAAGCAGGCGTTGTATGCCGTGCGCAATGAGCACACCGCGCTGGATATTGTGCAGGACGCGATGATTAAGCTTGCCGAAAAATATGGCGGCAAGCCAGCCGCAGAATTACCGCTGTTATTCCAGCGTATCCTGCAAAATACCATCCGTGATTACTACCGCAGGCAAAAAGTCCGAAACGCCTGGACAACCTTATTTTCCTCATTTGCCCCCAAAAATGAAGAGGCTGAATATGATCCGCTCGACAACCTGAAAGATGACGAAAACCGGAGCGCCCCCGCTGCGCCCGATGAGTCCCTGCAACAACGCCAGGTTATCGCGCTGATTGAACAGGCGCTTGGCAAACTGCCGGCGCGTCAACGCGAAGCCTTCCTGCTGCGTTACTGGGAAGGTTTGGACACGGCAGAAACTGCCACGGCGATGGGATGCACCGAAGGAAGCGTAAAAACCCACTGTTCGCGCGCGGCACATGCGCTTGCCATGTCTCTCAAAGGGAAAGGGATAAATCTGCCATGA
PROTEIN sequence
Length: 189
SNRTELSQFLSSVERRAYKQALYAVRNEHTALDIVQDAMIKLAEKYGGKPAAELPLLFQRILQNTIRDYYRRQKVRNAWTTLFSSFAPKNEEAEYDPLDNLKDDENRSAPAAPDESLQQRQVIALIEQALGKLPARQREAFLLRYWEGLDTAETATAMGCTEGSVKTHCSRAAHALAMSLKGKGINLP*