ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_132103_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(966..2789)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein tapB; K02454 general secretion pathway protein E Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 607.0
  • Bit_score: 1202
  • Evalue 0.0
type IV pilus assembly protein tapB; K02454 general secretion pathway protein E id=5082383 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 606.0
  • Bit_score: 1086
  • Evalue 0.0
type IV pilus assembly protein tapB similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 608.0
  • Bit_score: 923
  • Evalue 3.20e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGAAAACCTCCGCCAGAGCCCCGCTTTCCACGTCCCCGCAAGCCACCCCGGAGGCCCCGCTCGACTGGCGCCTGCTGGTGGGCTGGTTGCGCGATGACGGTGTCATCTCCGCCGACGAGGCCGCGCGCACCGTGGCGCGTTGCGCCTCAGCCCACAGCGCGCAGCACCCGCTGCAGCGCCTGGCGGTGGTGGGCATGGCGCGCCAGTCCGATGGCCATGTGCTGGACGTGGAGCTGCTTACCCAGTGGCTGGCCACGCGCAGCGGGCTGAGCTATTTCCGCATCGACCCGCTGAAGGTGGACGTGGGCAAGGTGGCCGACGTGATGAGCGCGGCCTACGCCGAGCGCCACAAGGTGTTGCCGGTGCAGGTGGGGCTGGCCGAGGTGGTGGTGGCCACGGCCGAGCCGTTCATCCGCGACTGGGTGCCCGAGGTGGAGCGCCAGACGCGCAAGAGCGTGCGCCTGGTGCTGGCCAGCCCGCAGGACATCGCGCGCTACACCGCCGAGTTCTTCGCGCTGGCCAAGTCGGTGCGGGCGGCCAACAAGCTGGGCGGCCAGGCGGGTTTTGGCAGCTTTGAACAGCTGGTGGAACTGGGCAAGGCCAACAAGCAGCTCGACGCCAACGACCAGCACGTGGTGCAGGTGGTGGACTGGCTCTGGCAGTACGCGTTTGACCAGCGCGCCAGCGACATCCACCTGGAGCCGCGGCGCGAGCAGGGTGTGATCCGTTTCCGCATCGATGGCGTGCTGCACCCGGTCTACCAGATGCCCATGGGGGTGATGAACGCCATGACCGCGCGCATCAAGCTGCTCGGGCGCATGGACGTGGTGGAAAAGCGCCGCCCGCAGGACGGCCGCATCAAGACCCTGCGCCCCGGTGTGGGCGCGGTGCGGGGCGACGAGGTGGAAATGCGTTTGTCCACCTTGCCCACCGCGTTCGGTGAAAAGATGGTGATGCGCATCTTCGACCCCGAGGCCACGGTGAAAGACCTGAGCGCGCTGGGCTTCGCCGCGCACGACGCACAGCGCTGGGAAACGCTCACGCACCGGCCGCACGGCATCATCCTCGTGACCGGCCCCACCGGCTCGGGCAAGACCACCACGCTCTACGCCACGCTCAAGCGCCTGGCGACCGAAGAGGTCAACGTGAGCACGGTGGAGGACCCGATCGAAATGATCGAACCCGCCTTCAACCAGGTCCAGGTGCAACCCCACCTGGACCTGGACTTTGCCCAGGGCCTGCGCGCCCTCATGCGGCAGGACCCGGACATCATCATGGTGGGCGAGGTGCGCGACCTGCCCACGGCCGAGATGGCGGTGCAGGCCGCGCTCACCGGCCACCTGGTGTTCACCACGCTGCACACCAACGACGCGCCCTCGGCCATCATGCGGCTGATGGAACTGGGCATCCCGCCCTACCTGATCAACGCCACCGTGCTGGGCGTGCTGGCGCAGCGCCTGGTGCGCACCCTGTGCCCGGCCTGCCGCACACGCGAGGACGACGTCACGGCCAAGGCCTCGCGCGAGGCCATGGAAGAGATCGTCAAGCCCTGGCAGGTCAGCGGCAAGTACCGGCCCTACCAGCCCGTGGGCTGCGTGGATTGCCGCATGACCGGCTACCGCGGGCGCACCGGCCTGTACGAGCTGCTGGTGGTGACCGAGGCGTTCAAGGACAAGGTCAGCCACGAGCCGCGCATGGAGGTGCTGCAGAAACAGGCCGTGGCCGATGGCATGCGTCCGCTGCGGCTGGCGGGCACGGTGCGCGTGGCCGAGGGGCTGACCACGCTCGACGAGGTGCTGGCCTGCACCCCCCCTTTGCACTGA
PROTEIN sequence
Length: 608
MKTSARAPLSTSPQATPEAPLDWRLLVGWLRDDGVISADEAARTVARCASAHSAQHPLQRLAVVGMARQSDGHVLDVELLTQWLATRSGLSYFRIDPLKVDVGKVADVMSAAYAERHKVLPVQVGLAEVVVATAEPFIRDWVPEVERQTRKSVRLVLASPQDIARYTAEFFALAKSVRAANKLGGQAGFGSFEQLVELGKANKQLDANDQHVVQVVDWLWQYAFDQRASDIHLEPRREQGVIRFRIDGVLHPVYQMPMGVMNAMTARIKLLGRMDVVEKRRPQDGRIKTLRPGVGAVRGDEVEMRLSTLPTAFGEKMVMRIFDPEATVKDLSALGFAAHDAQRWETLTHRPHGIILVTGPTGSGKTTTLYATLKRLATEEVNVSTVEDPIEMIEPAFNQVQVQPHLDLDFAQGLRALMRQDPDIIMVGEVRDLPTAEMAVQAALTGHLVFTTLHTNDAPSAIMRLMELGIPPYLINATVLGVLAQRLVRTLCPACRTREDDVTAKASREAMEEIVKPWQVSGKYRPYQPVGCVDCRMTGYRGRTGLYELLVVTEAFKDKVSHEPRMEVLQKQAVADGMRPLRLAGTVRVAEGLTTLDEVLACTPPLH*