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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_156704_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1395..3308)

Top 3 Functional Annotations

Value Algorithm Source
virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 637.0
  • Bit_score: 1258
  • Evalue 0.0
putative transmembrane conjugative DNA transfer protein; K03205 type IV secretion system protein VirD4 id=5081150 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 638.0
  • Bit_score: 965
  • Evalue 2.70e-278
virD4; type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 568.0
  • Bit_score: 646
  • Evalue 1.00e-182

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1914
ATGCGCCAGACCCGGTTGATGTTCCTGGTGGCCGTGCTGCTGGTGGCCTGTCTTGGTGGTGCTTACCTCAGTGGCCTGATCCTGTTCTGGCGCCTGGGTTTGCCGTTGGAGGAGCTGGGCCTGACCAGCTACCCGGCGTACTGGTGGGCCCATTCGGCGCACCCCCAGTTCGGGAAAACTGTGCAGACCAGCGGTCTGATGGGCTTTGCCCTGCCGTTGTTGGCGCTCCTGGGCGCGCTGGTGCTGGTGCTGAAAAAACAGCGCCCGAACCTGTACGGTGAGGCCCGTTTTGCCCAGATGGCCGACTTGCGCCAGCGCAAGATGCTTGCACCCTCGGACACCGCGCTGGTGGTGGGCAAGAAAGACGGCAAGTACCTGTATTTCAACGGGCAGCAGTTCGCCATACTGGCCGCGCCGACCCGCTCGGGCAAGGGCGTGGGCCTCGTGATTCCGAACCTGCTGAGCTACCAGGGCTCGGTGGTGGTGCTGGACATCAAGCAGGAAAACTTCGATCTGACCAGTGGTTTTCGCGCCCGCTACGGACAGGAGGTCTACCTGTTCAACCCCTTCGCGGAAGACCTGCGAACCCACCGCTGGAACCCGCTGGGCTATGTGTCCGATGACCCGAACTTCCGGGTCAGCGATGTGCAGAGCATCGCGGCCATGCTGTACCCGGCCACGGACCTGCACAAGGACCCGTTCTGGGCCAACCAGGCCCAGAACGCCTTTGTCGCGTTCGCGCTCTACGCGTTCGAGCAGGCCGCTTATCTGGCCCGCTTCTTCGGCTCGGGCGAGGACCGTCCCCAAGCGCCCACCATGGGGGCGCTCTACCGCCTGGCGTCCGGCCGCGCGGGCCAGGACATCAAGACCTATCTGGCCGACCTGGCCAGCTGGCCCCACCTGAGCCCGAGCGCGAAAGCGGCGTTCGCCACCTTGCTGGGGCAGGCGAACGAGACCTTTGCCAGCATCATGGGCACGTTCAAGGAGCCGCTGAACCCCTGGCTCAACCCCGTGGTGGACGCCGCCACAAGCGCCAACGACTTCGACATTCGCGACGTGCGCAAGAAGAAGATGAGCATCTACGTGGCGATCCAGCCCAACAAGCTGGCCGAAAGCCGCTTGATGCTCAACCTGTTCTTCAGCCAGCTGATCAACCAGAACACCCGGGAACTGCCCCAGGCCAACCCGGCGCTGCGGCACCAGTGCCTGCTGCTGATGGACGAGTTCACCAGCATCGGTCGGGTGGACATCATCGCCAGCGCGGTCAGTTTCATGGCCGGCTACAACCTGCGCCTGATGCCCATCGTCCAGAGCCTGTCGCAACTGGAATCGACCTACGGCAAGGAACAGGCACGCACCATCATGACCAACCACGCGCTGCAGATCATCTTTGCACCGCGCGAACAGCACGACGCCAACGAATACAGCGACATGCTGGGCTACACCAGCATGCGCAAGGACAGCGTGAGCCGCAGCAGGTCGCGCGAAAGCAGCTACACGCGCAGCGAGAGCGACGAGCGTCGCGCGCTGATGCTGCCGCAGGAGCTCAAGGCCATGGGCGACGACAAGGAAATTCTGCTCGTCGAGGGCATGGCCCACCCGGTGATGGCGGACAAGATCCGCTACTACCAGGACCCCGCATTCAAGGAGCGGCTGTTGCCCAAGGTGTCGGTGCCATTGCTGACCCTGCCGGGCAGTGAGCCCCTGGTTCCAGGCACCCGGGCCGACCCCACGCTGGCCCGCGATCCGATGCCGCAGACCCCACCGCCGGTGGTGCAGGAGAGCGTTGAGTCCTCGTTGGCGCAGCAGTACGAGGCGCATCGCCAGCGCATGCCCGCGACCCCCAGCGAATACACCGGGCTGGCGGGGATTCAACACGAGGTGGACGGGTTGCTGCACCAACTGGAACGGTAG
PROTEIN sequence
Length: 638
MRQTRLMFLVAVLLVACLGGAYLSGLILFWRLGLPLEELGLTSYPAYWWAHSAHPQFGKTVQTSGLMGFALPLLALLGALVLVLKKQRPNLYGEARFAQMADLRQRKMLAPSDTALVVGKKDGKYLYFNGQQFAILAAPTRSGKGVGLVIPNLLSYQGSVVVLDIKQENFDLTSGFRARYGQEVYLFNPFAEDLRTHRWNPLGYVSDDPNFRVSDVQSIAAMLYPATDLHKDPFWANQAQNAFVAFALYAFEQAAYLARFFGSGEDRPQAPTMGALYRLASGRAGQDIKTYLADLASWPHLSPSAKAAFATLLGQANETFASIMGTFKEPLNPWLNPVVDAATSANDFDIRDVRKKKMSIYVAIQPNKLAESRLMLNLFFSQLINQNTRELPQANPALRHQCLLLMDEFTSIGRVDIIASAVSFMAGYNLRLMPIVQSLSQLESTYGKEQARTIMTNHALQIIFAPREQHDANEYSDMLGYTSMRKDSVSRSRSRESSYTRSESDERRALMLPQELKAMGDDKEILLVEGMAHPVMADKIRYYQDPAFKERLLPKVSVPLLTLPGSEPLVPGTRADPTLARDPMPQTPPPVVQESVESSLAQQYEAHRQRMPATPSEYTGLAGIQHEVDGLLHQLER*