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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_130960_5

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 4200..5183

Top 3 Functional Annotations

Value Algorithm Source
outer membrane protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 327.0
  • Bit_score: 646
  • Evalue 2.60e-182
porin id=5079632 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 324.0
  • Bit_score: 381
  • Evalue 6.60e-103
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 339.0
  • Bit_score: 216
  • Evalue 1.40e-53

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGGAGTCCCCCTTGAAAAGAACCCTGATCGCTCTGGCCGCTGTGGCCGCTTGTGGCGCCGCCATGGCGCAATCTTCCGTCTCGGTGTATGGCCGTGTCGACCTCTCGCTGGGCAACCTCAAAGAGCTGGACAAGGGCAGCCAGAGCCGCATGATCGACGGCAACCTGACCTCCACCCGCCTGGGCTTTCGCGGCACCGAAGATCTTGGCGGCGGCCTCAAGGCCAGCTTCAAGATGGAGCACCGCTTCGACGCCGACACGGGCGCGTCGGAAGATCCGTTCTGGAAGGGCGAGTCCACACTGAGCCTCTCGGGCGGTTTTGGTGAGCTCAAGCTCGGCCGCAGCTCGACGATCTACGACGAAGTGCGCGGCCTGTCGGCCAGCAGCAGCGCGTTCGACTCGGCCTTCACGCCCTCTTCCAACGGCGTGTTCGGCTCGGGTGGCGACTACAGCAGCCGCTTCAACAACAAGATCACCTATGCGCTGCCGGCCATGGGCAACCTCTATGGCGGCGTCGAGTACGCGCTGGACGAAGACCCCGACGCCAAGGCCGACATGATCGGCGCCAAGCTGGGCTACAAGAGCGGGCCGCTGAACCTGGCCATGGGCCTGCAGCAGGAAAAAGGCAAGGACAACGACTACCTGATGGTCGCCGCCGCCTACGACTTCGGCGTGGCCAGCGTCTCGGGTGGCTACAACGTCCGCAACGGCAACGCCGCCACGGGCGACGACAACGAGTTCACCGTGGGCGTCAACGTGCCGCTGGGCGCGCTCCAGCTCTCGGCCGGCTTCGCCACCGGCAAGACCGAAAAGGCCGGCGCCACCTCGTCCAAAGCCTCGGGCTTTGGCCTGGGGGCAACCTATGCCCTGTCCAAGCGCACCAAGCTCTATGGCGGCCTGCGTTCACACAACGTGAAGGACGGCAGCGGGACCAAGACCGCCGACACCCGCCTGTTCGCCGTGGGTGTGCGCCACGACTTCTGA
PROTEIN sequence
Length: 328
MESPLKRTLIALAAVAACGAAMAQSSVSVYGRVDLSLGNLKELDKGSQSRMIDGNLTSTRLGFRGTEDLGGGLKASFKMEHRFDADTGASEDPFWKGESTLSLSGGFGELKLGRSSTIYDEVRGLSASSSAFDSAFTPSSNGVFGSGGDYSSRFNNKITYALPAMGNLYGGVEYALDEDPDAKADMIGAKLGYKSGPLNLAMGLQQEKGKDNDYLMVAAAYDFGVASVSGGYNVRNGNAATGDDNEFTVGVNVPLGALQLSAGFATGKTEKAGATSSKASGFGLGATYALSKRTKLYGGLRSHNVKDGSGTKTADTRLFAVGVRHDF*