ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_277237_3

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 2288..3295

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5082664 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 333.0
  • Bit_score: 527
  • Evalue 1.00e-146
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 332.0
  • Bit_score: 527
  • Evalue 1.40e-146
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 331.0
  • Bit_score: 378
  • Evalue 2.80e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGCAAAGCCGTTCCGTGTCTGCGGAAGACCTCGAGACGCTCGCCGCCGGCGACGATGTGGTGGAGGTCGAGACCCGCTTGTGCGAGGTTCCGGCCGACATGCACGGCTGGCGCATTGACCGCGCGTTGGCCCGGCTCATTCCCGAGTTCTCCCGCTCCTACCTGCAGCAGCTCATGGCCGACGGCGCGGTGTGGCTGCGAGGCGCGCCGGTCCACAAGGCCGCGACCCGCATCGCCGTGGGCGACCGCCTGCAGGTGGAACTGCGCCCCACCCAGCAGGCGATGGCCTTTGTGCCGCAACCCATGGCGCTGGAGGTGGTGTTTGAAGACGCCGACCTGCTGGTGATCAACAAGCCGGCTGGCCTGGTGGTGCATCCGGCGGCGGGCCACTGGAGCGGTACCTTGCTCAACGGCTTGCTGGCCCACCACGCCGCGGCAGCCAGCCTGCCCCGCGCGGGCATCGTGCACCGGCTGGACAAGGACACGTCGGGGTTGATGCTGGTGGGCAAGAGCCGGCAGGCGGTCGAGGCGCTGGTGCGTGCCATCGCCGCCCGCGAGGTCAACCGGCAGTACCTGGCGCTGGCACACGGGCGCTGGCAGGGGGTGGCCGAGCAGGCCGTCGACCAGCCGATCGGCCGCGATGTGCACAACCGGTTGCGCATGGCGGTGGTGCGGTCCGAGTCCACCACAGGCAAGCCGGCCCAGACCACCATGCGCCTGCTCGATGGGACGGAGCAGGCCTGCCTGGTCGCCTGCAAACTGCACACCGGTCGGACGCACCAGATCCGTGTGCACATGGCCTGGTTGGGGCACCCCCTTGTGGGCGACACCCTGTATGGCGGCAAGCCTTTGTGGGGAATGGCGCGCCAGGCACTGCACGCGACGCGGCTGCGCCTGCTGCACCCCACGCAGGGCCGGGCGCTCGATTTCCTGATCCCTCCGCCAGCGGATTTCCTGCAACTGCTGACCGAGACCGGTCTCCATTACAATGAAAGCCAACTGGGGTGA
PROTEIN sequence
Length: 336
VQSRSVSAEDLETLAAGDDVVEVETRLCEVPADMHGWRIDRALARLIPEFSRSYLQQLMADGAVWLRGAPVHKAATRIAVGDRLQVELRPTQQAMAFVPQPMALEVVFEDADLLVINKPAGLVVHPAAGHWSGTLLNGLLAHHAAAASLPRAGIVHRLDKDTSGLMLVGKSRQAVEALVRAIAAREVNRQYLALAHGRWQGVAEQAVDQPIGRDVHNRLRMAVVRSESTTGKPAQTTMRLLDGTEQACLVACKLHTGRTHQIRVHMAWLGHPLVGDTLYGGKPLWGMARQALHATRLRLLHPTQGRALDFLIPPPADFLQLLTETGLHYNESQLG*