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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_352665_2

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(764..1525)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase catalytic subunit Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 507
  • Evalue 1.50e-140
lytic transglycosylase catalytic subunit id=5079699 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 245.0
  • Bit_score: 341
  • Evalue 1.00e-90
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 245.0
  • Bit_score: 242
  • Evalue 1.40e-61

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
TTGAGCCGCAACACACTCCGTTGGCCCCGAGCCCTGGCGTTGGGGTGGCTGCTCCTGTGGGCGCTGGGATGGTCCGCGCCCGCCGCAGCGGAAATCTGGGGCTATGTGGACAAGCGCGGCGTGTCGCACTTCGCCGACCACCAGGTGGACCGGCGTTACGAGCTGTTCTACGGCGGCGGTGCCCGGTCCGCGGGCACGTCGCGGGGCCTGCCGCGTGGGGCCACCCATGCCTCACCCAGCGTGCAGACGGTTTTTCAGGTCTCCACCTCGTACAAGGCGGTGCGCCACCTGATCCGCGAAGCGGCCACGGCGTACGGGCTGGAATACGAGCTGCTCAAGGCGGTGATCGCCACCGAATCGGGGTTCAATGCCCGTGCGGTCAGCCCCAAGGGTGCCATCGGCCTGATGCAGCTCATGCCCGACACCGCGCAGCGCTTTGGTGTGAAAGCCCGGGCCAATGAATCGCTGCAGGAGCGCCTGACCGATCCCCGCACCAACCTGCAGGCGGGCGCGCGTTACCTGGCCTGGCTGCTGAAGTATTTCGACGGCCAGACCGAGCTGGCGCTGGCGGCCTACAACGCCGGCGAGGGCGCGGTGCTGCGCGCCGGACGCCAGATCCCGAACTACCGGGAAACCCAGAACTACGTGCGCAAGGTCACGCAACTGCAGCAATCGCTGCAACCGCCGCGCGCCCTGAGCCAGCGTTACGCGCCGGCGCCCGCAGACCTGCAGGCCAGGGCCCAAACCCCCGCGCCGCTCTGA
PROTEIN sequence
Length: 254
LSRNTLRWPRALALGWLLLWALGWSAPAAAEIWGYVDKRGVSHFADHQVDRRYELFYGGGARSAGTSRGLPRGATHASPSVQTVFQVSTSYKAVRHLIREAATAYGLEYELLKAVIATESGFNARAVSPKGAIGLMQLMPDTAQRFGVKARANESLQERLTDPRTNLQAGARYLAWLLKYFDGQTELALAAYNAGEGAVLRAGRQIPNYRETQNYVRKVTQLQQSLQPPRALSQRYAPAPADLQARAQTPAPL*