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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_442905_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(3..173)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 factor interaction domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 57.0
  • Bit_score: 119
  • Evalue 2.00e-24
sigma-54 factor interaction domain-containing protein id=5080040 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 57.0
  • Bit_score: 63
  • Evalue 7.00e-08

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGAGTGCCGCCATGTACACGCGCCCCCTCGGGAGAGGCGCTGATCCTGCGCCGCCCGCCGCCTCTGCCGAGGCGGGGCCGGACCCGATCGTGCAGTCGCACCAGCGGTCCCAGGCGTACGGCATCACCGCCAACACCGAGCCCGACTTCTCAAGCCCGGGCCGCGTGGCG
PROTEIN sequence
Length: 57
MSAAMYTRPLGRGADPAPPAASAEAGPDPIVQSHQRSQAYGITANTEPDFSSPGRVA