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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_254414_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 81..602

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 351
  • Evalue 5.50e-94
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5079423 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 175.0
  • Bit_score: 307
  • Evalue 8.40e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 168.0
  • Bit_score: 89
  • Evalue 1.30e-15

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGAACACCGCCCACCTGCCTATCTTGTCAACGCCCAACCTGGGCACCGTCTGCTGGACCGAGATGGTGAGCCACCGGAGCTATCTGATCCGCTTTGCCCAGCGCAAGCTCCACGACCCGATGCTGGCCGAAGACCTGGTGCACGACGTGTTTGAGGCGGTGATGTCCGGGTGCGCCGCGTTTTCGGGTCGCAGCGCGCTGCGCAGCTGGCTCACCAGCATCCTCAAGAACAAGCTGGTCGATCTGATCCGGGACCGTGCCCGGTACCACGAGATAGATGCCGACGACGATGCCGTGTCATTCGAATGCGACGCCGCCCGCCCGGACGAACTGGCCGAGCACCGCGAGCGCCTGGCGCAGACCCTGGCGCGCATCGAAGACCTGCCCCAGGGGTTGCGCGATGTGATGCGCTGGCGCGTGCTGCATGACGACGACACCGAGGTGGTGTGCGAACGCTTGGCGATCAGCCAGGACAGCCTGTTCGTGCGCCTGCACCGGGCGCGCAAACAGCTGCTGTGCTGA
PROTEIN sequence
Length: 174
MNTAHLPILSTPNLGTVCWTEMVSHRSYLIRFAQRKLHDPMLAEDLVHDVFEAVMSGCAAFSGRSALRSWLTSILKNKLVDLIRDRARYHEIDADDDAVSFECDAARPDELAEHRERLAQTLARIEDLPQGLRDVMRWRVLHDDDTEVVCERLAISQDSLFVRLHRARKQLLC*