ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_306522_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 3..1112

Top 3 Functional Annotations

Value Algorithm Source
D-alanyl-D-alanine carboxypeptidase PBP3; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=5082949 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 370.0
  • Bit_score: 593
  • Evalue 1.60e-166
D-alanyl-D-alanine carboxypeptidase PBP3; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=GWE1_Burkholderiales_6 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 369.0
  • Bit_score: 593
  • Evalue 2.30e-166
D-alanyl-D-alanine carboxypeptidase PBP3 similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 369.0
  • Bit_score: 356
  • Evalue 9.50e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GAACGCATCCACGACGCCTTCGTGGCCCTGCAGGACCAGGGCGTGCGCGTGGTCCTGGGCGACATGGTGCTCGACCACAGCGACTTCGAGCTGCCCGCGAGCGACCCCGGCGCCTTCGACGGCGAGGCCCTGCGCCCGTACAACGCCTCGCCCGATGCCCTGTTGGTGAACTTCAAGTCGGTGATCCTGAGCTTCCAGCCCGACCCGGCCGTGGGCGTGGCCTGGGTGCGCAGCGAGCCGCCGCTGGCGGGCCTGGCCGTCGACACCTCCGTGCCGCTCTCCGGCGGCGGCTGCGGCGACTGGCGCCTGGGCCTGCTGGCGCGTTTCGACGACGCCAACACCATCCGTTTCGGCGGCCGTTATCCGCTGGATTGTGGCGAACGCAGCTGGCCCGTGGCCTACCAGGACCCCGCCAGCTACGCCGCGCGCGCCCTGGAAGGCTTGTGGCGCGCCAGCGGCGGCGCGCTCACCGGCCAGGTGCGCACCGGCCCCACGCCGCCCGGCGCACGCCTGCTGCACGACGCGCGCTCGCTGCCGCTGTCGGACATCATCACCGACGTCAACCAGTGGAGCAACAACGTGATGGCGCAGCAGGTCTTCCTCACCCTGGGCCGGCTCTCGCCCGCCCAGGTGATGAGCGAGAGCACGCTGGCCGACCGGCTGGCCCTGATGCGCCCGGGCCGTTTCGAGCGCTCGCGCGAGGTGATCGCGGCCTGGTGGCGGCGCACCTTCGGGCAGCGCCACGAGCCCCCGGTGCTGCACAACGGCTCGGGCCTGTCACGCGACGAGCGCATCACCGCCGATGCGCTGGTGGGCCTGCTGCGACACGCCGCACGCCACCCGCAGGGCGAGCGCTTCGTGCAGTCGCTGTCCATCGCCGGCGTCAATGGCACGGCCGCCCGCATGGCGCAGGGCCCGCTCAGCGCGGCGCGTGGCAACGCCTGGCTCAAGACCGGCACCCTGCGCGACGTGATGGGGGTGGCCGGCTACGTCAACGCGGTCAACGGCACGCGTTACGCGGTGGTCGGCTTCATCAACCACCCCAACGCGCCGGCCGCGCGCCCGGCGCTCGAAGCGCTGGTGGAGTGGACGGCCTCGCAGGCCGATTGA
PROTEIN sequence
Length: 370
ERIHDAFVALQDQGVRVVLGDMVLDHSDFELPASDPGAFDGEALRPYNASPDALLVNFKSVILSFQPDPAVGVAWVRSEPPLAGLAVDTSVPLSGGGCGDWRLGLLARFDDANTIRFGGRYPLDCGERSWPVAYQDPASYAARALEGLWRASGGALTGQVRTGPTPPGARLLHDARSLPLSDIITDVNQWSNNVMAQQVFLTLGRLSPAQVMSESTLADRLALMRPGRFERSREVIAAWWRRTFGQRHEPPVLHNGSGLSRDERITADALVGLLRHAARHPQGERFVQSLSIAGVNGTAARMAQGPLSAARGNAWLKTGTLRDVMGVAGYVNAVNGTRYAVVGFINHPNAPAARPALEALVEWTASQAD*