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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_407621_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1..135

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=1261993 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 45.0
  • Bit_score: 84
  • Evalue 3.90e-14
ECF subfamily RNA polymerase sigma-24 subunit Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 44.0
  • Bit_score: 84
  • Evalue 5.40e-14
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 44.0
  • Bit_score: 61
  • Evalue 9.90e-08

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 135
TTCCTGCTGCAGGCCGAAGGCGGCCTGAGCCTGGCCGAGATCGCACAGACCACCGGCGTCAGCCCGGAGACGGCCAAGAGCCGGCTGCGCTACGCCCGCGCCCGCCTGCGCGAAACCCTGGAGGCGCACGCATGA
PROTEIN sequence
Length: 45
FLLQAEGGLSLAEIAQTTGVSPETAKSRLRYARARLRETLEAHA*