ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_285688_1

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2..598)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor TAXI family protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 398
  • Evalue 7.60e-108
TRAP transporter solute receptor TAXI family protein id=5079455 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 199.0
  • Bit_score: 346
  • Evalue 1.90e-92
TRAP transporter solute receptor TAXI family protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 213.0
  • Bit_score: 265
  • Evalue 1.60e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCCCACAACATCCGCTACACCCTGCTGTCGCTGCGCGATCTGGCGGTGTCCTTCGGCCCGTTCGCGCTACTGACCGTCGCCCTGCTCGCGCTCACCTACTGGTGGCTCGACCCCAATCCGCCCAAGCGCGTGGTGCTGGCCACCGGCCCGGCACAAAGCGCCTACGACGAGTTCGGAAAACGCTATGCCGACGCGCTGGCGCGCTACGGCATCACCGTGGAACTGCTGCCCTCCGAAGGCTCGTCGGCCAACCTCGAACTGCTGCGCACCGGCCGGGCCGACCTGGGATTCGTGCAGGGCGGCAGCGCCGACATCGGCTATGACGATGAGGAGTCGATCTCTTCGCTGGGCAGCCTGTTTGTCGAACCGCTGTGGCTGTTTTACCGGGAAGACTCGGCGCAGCGCCTGAACCAGACAGACACCATCACCACCCTGACCGAGCTGCAGGGCTGGCGCGTCAACGTGGGCACCCCCGGCAGCGGCGTGCCGCGCCTGTTTTCCACCCTGCTCGACGTCAACCGCGTGGAGCGCGACCAGCTCCAGCTCAGCGAGCTGGAACAGACCCCGGCCACCGTCGCCTTTCTGGACGGCCAG
PROTEIN sequence
Length: 199
MPHNIRYTLLSLRDLAVSFGPFALLTVALLALTYWWLDPNPPKRVVLATGPAQSAYDEFGKRYADALARYGITVELLPSEGSSANLELLRTGRADLGFVQGGSADIGYDDEESISSLGSLFVEPLWLFYREDSAQRLNQTDTITTLTELQGWRVNVGTPGSGVPRLFSTLLDVNRVERDQLQLSELEQTPATVAFLDGQ